Gene Bphyt_3011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3011 
Symbol 
ID6284051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3398117 
End bp3398815 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content61% 
IMG OID642622581 
Product3-demethylubiquinone-9 3-methyltransferase 
Protein accessionYP_001896629 
Protein GI187924987 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID[TIGR01983] ubiquinone biosynthesis O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0573417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0163533 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACG CCGATCCCCA CGAACTGCAG AAATTTAGCG ATCTCGCGCA TCGTTGGTGG 
GACCCGAATG CCGAATTCAA GCCCTTGCAT GAGCTCAATC CGATTCGCCT GAAGTGGATC
GATGCGCACG CGCATCTCGC GGGCAAGACG GTGCTGGATA TCGGCTGCGG CGGCGGCATT
CTGTCCGAGT CCATGGCCGG TTTGGGCGCG CATGTGAAGG GCATCGACCT GTCGACCCAA
GCTTTGGGCG TGGCCGATCT TCACAGCCTT GAAAGTGGTG TAACCGTCGA TTACGAAGAA
ATCGCCGCCG AGGCGCTCGC CGCCCGCGAA CCCGCGAAGT ACGACGTCGT GACCTGCATG
GAAATGCTCG AGCACGTGCC TCAACCTGCC GCCATCGTCG AGGCGTGCAA GACGCTGGTG
AAACCCGGCG GCTGGGTGTT CTTTTCCACC CTGAACCGCA ACGTGAAGTC ATACCTGTTC
GCCGTGATCG GCGCCGAATA CATCGCGCGC ATGCTGCCCA AAGGCACGCA CGATTACGCG
CGCTTCATTC GCCCGTCGGA ACTGGCGAGC TTCGTGCGCG CCGCCGACCT GCGCACGGCC
GATATCAAAG GCATCGTGTA CAACCCGCTC AGCAAGCATT TCATGCTGTC CGCCGACACG
AGCGTGAACT ACATGCTCGC TTGCCGCCGC GACGTTTGA
 
Protein sequence
MTNADPHELQ KFSDLAHRWW DPNAEFKPLH ELNPIRLKWI DAHAHLAGKT VLDIGCGGGI 
LSESMAGLGA HVKGIDLSTQ ALGVADLHSL ESGVTVDYEE IAAEALAARE PAKYDVVTCM
EMLEHVPQPA AIVEACKTLV KPGGWVFFST LNRNVKSYLF AVIGAEYIAR MLPKGTHDYA
RFIRPSELAS FVRAADLRTA DIKGIVYNPL SKHFMLSADT SVNYMLACRR DV