| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3005 |
|---|
| Symbol | |
|---|
| ID | 6284045 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 3389705 |
|---|
| End bp | 3390817 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642622575 |
|---|
| Product | histidinol-phosphate aminotransferase |
|---|
| Protein accession | YP_001896623 |
|---|
| Protein GI | 187924981 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
|---|
| TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.13886 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0347946 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCGT CTTTCGGTCC TTCCTACGTG CGCGCGATTG CGCCTTACAT CGCAGGCAAA
CCGATTTCGG AAGTGGCCCG CGAGTTCGGT CTGGACGAAG CGACCATCGT GAAACTCGCG
TCGAACGAAA ATCCGCTCGG CATGCCGGAG TCGGCGCAGC GCGCCATGGC GCAGGCCGCG
AGTGAACTAG GCCGCTACCC GGACGCGAAC GCATTCGAGT TGAAGGCGGC GCTGAGCGAG
CGCTACGGTG TGCCGGCCGA CTGGGTCACA CTCGGCAACG GCAGCAACGA CATCCTCGAA
ATCGCTGCGC ACGCGTTTGT CGAAAAGGGC CAGTCAATCG TTTATGCACA GTACTCGTTC
GCGGTTTATG CGCTGGCTAC GCAAGGTCTG GGTGCGCGCG CGATTGTCGT GCCGGCCGTT
AAATATGGTC ACGACCTCGA CGCGATGCTC GCCGCCGTTA GCGACGACAC GCGCCTGATT
TTCGTCGCGA ATCCGAACAA CCCGACCGGC ACGTTCATCG AAGGCCCGAA GCTCGAGGCG
TTTCTCGACA AGGTGCCGCG CCACGTGGTC GTCGTGCTGG ACGAGGCGTA CACGGAATAT
CTGCCGCAAG AGAAGCGCTA CGACTCGATC GCGTGGGTGC GTCGCTATCC GAATCTGCTG
GTGTCGCGCA CGTTTTCGAA GGCCTTCGGT CTTGCCGGTT TGCGCGTGGG TTTCGCGATC
GCGCAACCTG AACTGACCGA TTTGCTGAAT CGTGTGCGTC AGCCGTTCAA CGTGAACACG
CTCGCGCAAG CCGCGGCAAT CGCCGCGCTG AACGACAAGG CGTTCCTGGA AAAGAGCGCC
GCGCTGAACG CGCAGGGCTA TCGCCGACTG ACCGAAGCGT TCGACAAGCT CGGCCTGGAG
TATGTGCCGT CGGACGGCAA CTTCGTGCTG GTGCGTGTCG GCAACGACGA CGCGGCCGGC
AACCGCGTCA ACCTCGAATT GCTGAAGCAA GGCGTGATCG TGCGTCCGGT CGGCAACTAC
GGTTTGCCGC AGTGGCTGCG CATCACCATC GGCCTGCCGG AAGAAAACGA AGCATTTATC
GCGGCGCTTG AAAGGACGCT CGCCGCCGCG TAA
|
|---|
| Protein sequence | MTASFGPSYV RAIAPYIAGK PISEVAREFG LDEATIVKLA SNENPLGMPE SAQRAMAQAA
SELGRYPDAN AFELKAALSE RYGVPADWVT LGNGSNDILE IAAHAFVEKG QSIVYAQYSF
AVYALATQGL GARAIVVPAV KYGHDLDAML AAVSDDTRLI FVANPNNPTG TFIEGPKLEA
FLDKVPRHVV VVLDEAYTEY LPQEKRYDSI AWVRRYPNLL VSRTFSKAFG LAGLRVGFAI
AQPELTDLLN RVRQPFNVNT LAQAAAIAAL NDKAFLEKSA ALNAQGYRRL TEAFDKLGLE
YVPSDGNFVL VRVGNDDAAG NRVNLELLKQ GVIVRPVGNY GLPQWLRITI GLPEENEAFI
AALERTLAAA
|
|---|
| |