Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3002 |
Symbol | cmk |
ID | 6282800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3386665 |
End bp | 3387351 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642622572 |
Product | cytidylate kinase |
Protein accession | YP_001896620 |
Protein GI | 187924978 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0283] Cytidylate kinase |
TIGRFAM ID | [TIGR00017] cytidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.890159 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.00995031 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACCGA CCCGTCCCTT TCACCAGACG CCCGTCATTA CGATCGACGG CCCGAGTGCC TCCGGCAAAG GCACCGTGGC CGCGCTGGTG GCCGCGAGCC TCGGCTTCCA CTTGCTGGAT AGCGGCGCGC TGTACCGTCT CGCCGCGCTC GCCAGCTTGC GCTACGGCAT TTCGGGCGAC GATGTCGACG CCCTTGTAAA ACTGATCGAC GATCTACACA TCACCTTTCG CGAGGGACTG GCGCAACTCG ACGGCGTCGA CGTATCGGCC GAGATTCGCG CCGAGGAGGT GGGCGGCCGT GCCTCGGCGA TTGCCGTGCA CGCGCCGGTG CGTGCCGCGC TGGTGGCGCG TCAGCGGGCT TTCCGCAAGG AGCCGGGACT GGTCGCCGAC GGCCGCGACA TGGGCACGGT GATCTTCCAG GATGCCGTGC TGAAGGTGTT CATGACCGCA AGCGTCGAGG CCCGCGCGGC GCGCCGGCAT AAGCAATTGA TCCAAAAAGG ATTTTCTGCT AATATAGATG ACTTGCTCCG GGATTTGCGT GAGCGCGATG AGCGTGACAG TCAGCGTGTA GCCGCGCCAC TCAAGCCCGC AGCGGATGCC AAGCTGCTTG ATACCTCCGC ATTGTCGGTC GACCAGGCGG TCGAGCAAGT GGTGCAGTGG TATGAAGCTT TAGTCCCACA TGCCTGA
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Protein sequence | MKPTRPFHQT PVITIDGPSA SGKGTVAALV AASLGFHLLD SGALYRLAAL ASLRYGISGD DVDALVKLID DLHITFREGL AQLDGVDVSA EIRAEEVGGR ASAIAVHAPV RAALVARQRA FRKEPGLVAD GRDMGTVIFQ DAVLKVFMTA SVEARAARRH KQLIQKGFSA NIDDLLRDLR ERDERDSQRV AAPLKPAADA KLLDTSALSV DQAVEQVVQW YEALVPHA
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