| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2992 |
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| Symbol | |
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| ID | 6283541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3375844 |
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| End bp | 3377022 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642622562 |
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| Product | lytic murein transglycosylase B |
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| Protein accession | YP_001896610 |
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| Protein GI | 187924968 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.106271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00132596 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCGCCG CACTGTCCGT CGCATCGTGC ATGTTCATGG CAACCAGTCC GGCGAGCGCG
CAAAGCGCCG CCAAAAAGCC GCCGGTGCTG CTCGCGCAAA GCCAGCCGCA ACCCGCGGTG
CCGCAAGGGC AAACGTTTGA AGAAGAGATC ATCCCGCAGC GCTACGCGAA CAATGCCGAC
GTCAACGCGT TCATCAACGA CATGGTCGCG CGCTACGACT TCGACGAATC CACGCTGCAC
TCGCTCTTTG CCGGCGTGAG TTATTCGGCC ACCGCGGTCA AGCTCGTGAC ACCATCGCCG
TCGCCGTCGG TGAAGAACTG GCGCGTGTAT CAGTCGCGCT TTCTCGACCA GGTGCGCATC
AATGCCGGCG TGCGCTTCTG GCGCGCGAAC CAGGCCACGC TGCAACGCGC CTATGAAGAG
TTCGGCGTGC CGCCGGAAGT GATCGTCGGC ATCATCGGCG TCGAGACGAT CTATGGGCGC
TTCATGGGCA ACTTCCGCGT GCTCGATGCG CTGACCACGC TCAGCTTCGA TTATCCGAGC
ACCGCCAATC GCGCGGATCG CCAGGCGACC TTCCGCAAAA ACCTTGAAGA CTACCTGGTG
TGGACGCGCG ATTCGCAGAT CGATCCGACC ACGGTGCTCG GGTCGTACAC CGGCGCGATC
GGCATTCCGC AGTTCCTGCC GAGCAGCATC GTGCAATACG CGGTGAGCTA CGATGGCAAC
AAGCGGATCG ACTTGCGCAC GAGCCAGGCG GATGCGATCG GCAGCGTGGC GAATTATCTG
CGTCAGAACG GCTGGGAAAA CGGCCGGCCG GTGGTGTGGA AGATCGGCTC GGACGCCGGC
AGCCTGGGTG TCGCGCAAGC CGCCGCCGAC GGCCAGCCGG AGCCGCACTG GCCGCTCGAT
CAATTGCTGC GCGCCGGCTT GCTGCTGAAC GAACCGGGTG TGGATGTGGC GTCGGAGGCC
GGCACGCCGG TGACGGTAGT GGACCTGCCC TCGCCGGGAC GCGGCACCGA GTTCATGCTG
GGCTTGAAGA ATTTCTATGT GCTGACGCGC TACAACCGCA GTTTCTTTTA TGCGCTGGCG
GTGTATCAGT TAGGTCAGCG GGTCAAGGCG CAAATGGAAG CCGGCGACAC AACCAACGCC
GTCAACAACG CGGCGCCGCC GGTTGCGGCC TCGCAATAG
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| Protein sequence | MAAALSVASC MFMATSPASA QSAAKKPPVL LAQSQPQPAV PQGQTFEEEI IPQRYANNAD
VNAFINDMVA RYDFDESTLH SLFAGVSYSA TAVKLVTPSP SPSVKNWRVY QSRFLDQVRI
NAGVRFWRAN QATLQRAYEE FGVPPEVIVG IIGVETIYGR FMGNFRVLDA LTTLSFDYPS
TANRADRQAT FRKNLEDYLV WTRDSQIDPT TVLGSYTGAI GIPQFLPSSI VQYAVSYDGN
KRIDLRTSQA DAIGSVANYL RQNGWENGRP VVWKIGSDAG SLGVAQAAAD GQPEPHWPLD
QLLRAGLLLN EPGVDVASEA GTPVTVVDLP SPGRGTEFML GLKNFYVLTR YNRSFFYALA
VYQLGQRVKA QMEAGDTTNA VNNAAPPVAA SQ
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