| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2986 |
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| Symbol | |
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| ID | 6280785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3370094 |
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| End bp | 3370891 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642622556 |
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| Product | lipoprotein, YaeC family |
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| Protein accession | YP_001896604 |
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| Protein GI | 187924962 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
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| TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.27148 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00263956 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAACGTC GTTTCATTCT CAAGCTGGCT GCCGCGCTCG GCGCCGCATC GCTCATCGCC
GCCAACGCGG CTTACGCTGA AGACACGATC AAGGTCGGCG TCACCGGCGG TCCGCACGCG
CAGATCATGG AGGTCGTGAA GACGGTCGCG GCCAGGAACG GTCTGAACAT CAAGATCGTC
GAATTCTCCG ACTACGTGCA ACCGAACGCC GCGCTCGCCG GCGGCGATCT GGACGCGAAC
AGCTACCAGC ACGACCCGTA TCTGCAAGCG CAGGTGAAGG ACCGCGGCTA CAAGCTGATC
CGTATCGCGG ATACGGTCAC GTACCCGATG GGCATCTATT CGAAGAAAGT GAAGACGCTC
GCCGAACTGC AACCGGGCGC GAAGATCGCG GTGCCGAACG ATCCGACCAA CGGCGGCCGC
GCGCTGCTGT TGCTGCAAAA GCAGGGTCTG CTGAAACTGC GTGCCGACGC GGGCCTGAAG
GCGACGCCGC TCGATATCGT CGACAATCCG AAGAAGCTGA AGATCGTCGA GCTCGACGCT
GCGCAGATTC CGCGCTCGCT GAACGACGTG GACGCGGCCG CGATCAACAC GAACTTCGCG
ATGGAAGCAG GTCTGAAGCC CAAGCAGGAC GCTATCGCGA TCGAAGACCC GAAAGGTCCT
TACGTGAACG TCATCGCCAT CCGCGAGGCA GACAAAAATA AGCCGTGGGT TGCCAAGCTG
GTCGCGGCGT ATCATTCGCC GGAAGTGAAG CAGTTCGTGG AAAGCAAATT CGGCGGGTCG
GTCATCACCG CGTGGTAA
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| Protein sequence | MQRRFILKLA AALGAASLIA ANAAYAEDTI KVGVTGGPHA QIMEVVKTVA ARNGLNIKIV
EFSDYVQPNA ALAGGDLDAN SYQHDPYLQA QVKDRGYKLI RIADTVTYPM GIYSKKVKTL
AELQPGAKIA VPNDPTNGGR ALLLLQKQGL LKLRADAGLK ATPLDIVDNP KKLKIVELDA
AQIPRSLNDV DAAAINTNFA MEAGLKPKQD AIAIEDPKGP YVNVIAIREA DKNKPWVAKL
VAAYHSPEVK QFVESKFGGS VITAW
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