| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2976 |
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| Symbol | rimM |
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| ID | 6280949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3359657 |
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| End bp | 3360403 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642622546 |
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| Product | 16S rRNA-processing protein RimM |
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| Protein accession | YP_001896594 |
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| Protein GI | 187924952 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.470421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0518366 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAGC GTGATTCCGG CAGTTCAGGT CGCGCAAAGG CAGCGGCGGC AGTAGCGGCA
GCAACCCCGC GCGCGAAGAC GTCTGGTCCG GCGCCGTTCG GTGCATTCGT CCGCAAGCCG
GTCGAAAAAG CCGAAGGCAA GGCGAAAGCC CAAGTTGCTA ACGCCGGTTC CGGCGCGGCA
GAAATGCGCA TGGAAACGGT GGAAAGCTGG CCGGCCGATG CGGTTGAGGT CGGCGCAATC
GTCGACGCTT ACGGCCTCAA AGGCTGGGTC AAGGTGGCCG CGCACGCGGA TGCCGGCCAC
GGTGGCGATG CGTTGCTGAG CGCGAAGCGC TGGTGGCTGA TCAAAGGCCA GGAGCGCAAA
TCGGCGCCGT CGTTGCAGGC GAAAATGCAT AGCGACAGTG TGGTTGCCCA TCTGGGCGGC
GTCACTGACC GCGATGTGGC TCTGGCACTG CGCGGCTCCC GCGTCTATAT CAGCCGCAGC
GAATTTCCGG CTCTCGGAGC CGACGAATTC TACTGGGTCG ACCTGCTCGG CCTGGATGTG
GTGAACGTTG CCGGGGTCAA TCTCGGCAAG GTTGCAGACA TGATCGACAA CGGTGCGCAC
TCGGTGTTGC GCATCGAATA CCCGGATACC GACAAAAGCG GCAAGCCGGT CATCGGCGAG
CGTTTGATCC CGTTCGTCGG CGTCTTTGTC AAAACGGTGG ACCAGGCGGC GAAGCAGATC
ACTGTCGACT GGGAAGCCGA TTACTAA
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| Protein sequence | MSERDSGSSG RAKAAAAVAA ATPRAKTSGP APFGAFVRKP VEKAEGKAKA QVANAGSGAA
EMRMETVESW PADAVEVGAI VDAYGLKGWV KVAAHADAGH GGDALLSAKR WWLIKGQERK
SAPSLQAKMH SDSVVAHLGG VTDRDVALAL RGSRVYISRS EFPALGADEF YWVDLLGLDV
VNVAGVNLGK VADMIDNGAH SVLRIEYPDT DKSGKPVIGE RLIPFVGVFV KTVDQAAKQI
TVDWEADY
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