| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2943 |
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| Symbol | |
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| ID | 6282690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3324276 |
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| End bp | 3325688 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642622513 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001896561 |
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| Protein GI | 187924919 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.223425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAAT CCGGCATCAC CCGTGTGGCC GCCCGGCCGC CGACCCTGAC CCGCCACGCG
GCGGACACCG CGCGGCTCGC CGCGCCGCTT GCCATCGCAC AGCTCTCGCA AATGGCGATG
GGCGTCACCG ACACGATCCT GCTCGGCTCG CTCGGCCCCG ACGCGCTCGC CGCCGGCGGC
CTCGGCGCAA ATCTGTTTTT CGTGGTGGTC ACGCTGCTGC AAGGCGTGTT GACCTCCGTC
AGCGTGAGCG TGTCGCACGC GCGCGGCGCG CAGGACGAAG GCCGCGTGCC GCACATCTAC
TGGACTGGTC TCGTGCTGTC CGTGCTGCTG TCGGTGCCGG CGTTCTTCCT GCTCTCGTTC
GCCACGCCGA TCCTGCTCGC TTTCGGCGAA CCCGCGCTGC TCGCGCACAA CGTCGGCGAA
TATTCGGCGG TGCTGCGTTG GGGCTCGCTC GGCAGCCTGA TCGGGGTCGG CCTGATGCGG
TCGTTTCTGC CGGCGATCGG CGCGGCCAAA CGGCTTTTGT GGGTGTCGCT GGCGAGCGTC
GGCGTGAACG GTTTTCTGAA TTACGGCCTG ATCCACGGCG CCTATGGTCT GCCGCGGCTC
GGTTTTCTCG GCTCGGCGGC CGCGACCTCG ATCACCGTCT GGCTGAGCGC GCTCGTGTTG
ATGGCGCTGC TGCATTTGCG CCCGCGTTAT CGCCATTTCG TCGTCGCCAC GCGGCCGAAC
GTGCCGCTGA TGGGTGAACT GTTCGGCATC GGCTGGCCGG TCGCGATCAC CTACGGCGTC
GAGTCCACGC TCTTTCTCGC CACCGGCCTG ATGGTCGGCC TGCTCGGCGA GTCGCAACTG
GCCGCGCATC AGATCGCGCT GAATGTAGCC TCCGTGGCCT TCATGGTGCC GCTGGCGATA
GGCCAGGCGG CGAACGTGCG CGTCGGCTTC TGGTCCGGCG CCGGCCAGCC GCTCGCCGCG
CGCCACGCTG GTTTCGTCGC GCTCGCGCTC GGCGTCGCTT TCATGACGTT GTCGGGCCTC
GTGCTGATCG CCGCCCCGCA CTGGATCGTC GGCCTCTATC TGCATCTCGA CGATCCGGCC
AACGCGGCCA CGGTCAAGCT CGCGAGTTCG CTGCTCGGCG TGGCGGCAAT CTTCCAGATC
GTCGATGGCA TGCAGACGGT CGGCTCCGGC TGTCTGCGCG GCCTGAAAGA CACGCGCGTA
CCGATGATCG CCGCCGCCTT CGGCTACTGG GCGATCGGTT TTCCGACCGG CTACACGCTG
GCGTTTCACT TCGGCCTCGG CGCTCGCGGA CTGTGGTGGG GACTCGCGGC CGGCCTCGCC
AGCGTCGCGC TGCTGATGAC GCTGCGCTTT CACAAACTGA GCCTGCGGCG CGTGCCGGCC
GTGTCTGGCG CGTCGCCGGT TAAACCGGTT TGA
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| Protein sequence | MTQSGITRVA ARPPTLTRHA ADTARLAAPL AIAQLSQMAM GVTDTILLGS LGPDALAAGG
LGANLFFVVV TLLQGVLTSV SVSVSHARGA QDEGRVPHIY WTGLVLSVLL SVPAFFLLSF
ATPILLAFGE PALLAHNVGE YSAVLRWGSL GSLIGVGLMR SFLPAIGAAK RLLWVSLASV
GVNGFLNYGL IHGAYGLPRL GFLGSAAATS ITVWLSALVL MALLHLRPRY RHFVVATRPN
VPLMGELFGI GWPVAITYGV ESTLFLATGL MVGLLGESQL AAHQIALNVA SVAFMVPLAI
GQAANVRVGF WSGAGQPLAA RHAGFVALAL GVAFMTLSGL VLIAAPHWIV GLYLHLDDPA
NAATVKLASS LLGVAAIFQI VDGMQTVGSG CLRGLKDTRV PMIAAAFGYW AIGFPTGYTL
AFHFGLGARG LWWGLAAGLA SVALLMTLRF HKLSLRRVPA VSGASPVKPV
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