| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2922 |
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| Symbol | |
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| ID | 6281685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3301267 |
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| End bp | 3304560 |
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| Gene Length | 3294 bp |
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| Protein Length | 1097 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642622490 |
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| Product | ribonuclease, Rne/Rng family |
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| Protein accession | YP_001896540 |
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| Protein GI | 187924898 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000705961 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.54344 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAA TGTTGTTCAA CGCAACGCAG CAGGAAGAAC TGCGCGTCGC CATCGTCGAT
GGGCAAAAAC TCATCGATAT CGACATCGAA ACCGCCGGGC GCGAACAGCG CAAAGGCAAC
ATTTACAAGG GCATCATTAC TCGCATCGAG CCGTCGCTCG AAGCCTGTTT CGTCAACTAC
GGCGAAGACC GCCACGGCTT CCTGCCGTTC AAGGAAGTCG CCCGCCAGTA TTTCCGCGAC
GGCGTCGACA TGCGTTCCGC GCGCATCCAG GACGCGCTGC GTGAAGGCCA GGAACTGATC
GTTCAGGTCG AAAAAGAAGA ACGCGGCAAT AAGGGCGCGG CCCTCACCAC GTTCATCTCG
CTCGCCGGCC GCTATCTGGT CCTGATGCCG AACAATCCGC GCGGCGGCGG CGTGTCGCGC
CGGATCGAAG GCGACGACCG TCAGGAACTG CGCGAAACCA TGGCGCAGCT GCAACTGCCG
GAAGGCATGA GCATCATCGC GCGCACGGCC GGCATCGGCC GCAGCGCCGA AGAACTGCAA
TGGGACCTGA ACTACCTGAT GCAACTGTGG CGCGCTATCG AAGCCGCGTC GCAAAGCGGT
TCGAGCGGTC AGCCGATGCT GATCTATCTC GAATCCAGCC TCGTGATCCG CGCGATCCGC
GACTACTTCC AGCCGGACAT CGGCGAAATT CTGATCGACA CCACTGAAAT TCATGACCAG
GCCCGCGCCT TCATGGATAT CGTGATGCCG GATAATGTCA GCAAGGTGAA GCGGTATCAC
GACGATGTAC CGCTCTTCTC GCGTTTCCAG ATCGAACACC AGATCGAAAC GGCGTATTCG
CGCACCGTGC CGCTGCCCTC GGGCGGCGCG ATCGTGATCG ATCACACCGA AGCGCTGGTC
GCGATCGACG TGAACTCGGC GCGCGCCACC AAGGGCGCCG ACATCGAAGA AACGGCCGCG
CGCACCAACC TCGAAGCCGC CGACGAAGTC GCCCGCCAGC TGCGTCTGCG CGACCTGGGC
GGCCTGATCG TGATCGACTT CATCGACATG GAGTCCGCCA AGAGCCAGCG CGAAGTCGAG
CAACGCCTGA AAGACGCCCT CAAGCACGAC CGCGCGCGCG TCCAGATGGG CAAGATCTCT
CGTTTCGGCC TGATGGAACT GTCGCGTCAG CGTCTGCGTC CGGCGCTCTC GGAAGGCAGT
CACGTGACCT GCCCGCGCTG TAACGGCACG GGCCACATCC GCGATACCGA ATCGTCCGCG
CTGCAAGTGC TGCGGATCAT TCAGGAAGAG GCAATGAAGG AAAACACCGC GGCAATTCAC
TGCCAGGTGC CGGTCGAAGT GACCGCCTTC CTGTTGAACG AAAAGCGTGC CGAGATCAAC
AAGATCGAGT CGCGTTTCAA GGTCAACGTC GTGCTGATCC CGAACAAGCA CCTCGATACG
CCGCATTACA AGCTCGAGCG TCTGCGTCAC GACGACGCGC GCCTCGACGA CCCGCGCGCT
TCGTGGAAGA TGGCCGAAGA AGCGGCCCGC GAACTGGAAT CGGAAACCGG TTACAGCAAG
CGTACCGAAG AAGTGAAGCC GAAGCAGGAA GCGGCGGTCA AGGGCATCAC GCCTGAAAAG
CCGGCGCCGA GCGCGCCTGT GCGCCCGGTC GCGGCCCCCG CTCCGGTCGC GGTTACGCCG
GCGAGCGGCG GCTTCATCGG CTGGTTGAAG AATCTGTTCG GCGTGCAGCC GGCCGCTCCG
GCGCCCGTCG CGCCTGCAGC GACCGATAAG CAGGCGCGTC CGCAACGCGG CGAACGCACG
GAACGCGGTG AGCGCACCGG CGAACGCGGC GGCGATCGCA ACCGCAATCG CCGCACTGGC
ACGGGCACTC GCGATGCAGC GGGCCGTGGC GAAGGCACGA CCGGCGGCCG TCAAGCCCAA
GGTCAGCAGC CGTCGCAACG CCGCGAAGAA CGCGAGCCGC GTGAAGGCCG TGAAACACGC
GAAGGCCGCG AGCCGCGCGA AGCACGGGAA GCGCGTGAAC CGCGTGGCAA CCGTGAGCCG
CGTGAAGCCC GCGAAGGCCG TGAACCGCGC GAGGCCCGTG AGCCACGCGA GGGTCGTGAA
AATCGTGACC GCGACAATCG CGGTGCCGAG CGCGCGGAAA CGGCGGAAGC CGCACCGCGT
GGCGAACGTC AGGAGCGCGG CGAGCGCCGT GAACGTGGCG AGCGCGCGGA ACGAGGTGAA
CGCCGCAAGC CGCAAACGGA AACCGCGGAC GCATTGACGC AAAGCGAAGC GCAAACGGCG
GAAGAACTGG TGCAAAACCA GACCGCTTTG GGCGAAAACG GCGCGCCGAT CGATCAGGAA
GCAGTGGCGC GTGAAGGCGA AGAGCGTCGT CGTCGCCGTC GCGGCCGTCG CGGTGGCCGT
CGTGAGCGTG AAGAGGACGT GAATGGCAAT CTGGCGGCGG ACGTCGCAGA AGCTGAAGGC
GACAATGCAA GCGCAACCGA CGAAGCGCCT GTGCGCACGG CGCATCAGCC GGTCGAGCGC
AAGCCGGAAG TCGTCGAGGC GAAGGACGTG ACGCCGGTCG AAGTAGTGGT CGCTGCTGTC
GCGACGCAAA CCGCCGTTGT GACCGAACTG CACGCCGCAA CCGAAACGCC GGCTCTGGCC
GTCGAAAAGG CTGCGAAGAC GGAAACGGTA GTACCGGTCG CGGAAGCGCC GGTTGCGCCG
GCAGTCGTCG AGCCGGTCGC CGAAACGCCG GTGGCGCAAG CCGCTGCGGA GCCCGTCGAA
GCAGCGCAAG CGGCGCCGGC CGCCAGCGAA ACGGTTTCGC TGGTTGAACC GGTCGCACGC
GTCGAAGCCC CGGCTCATGC GCACGTCGAA GCGCCTGCGG TTGCGCCGGT TGTCGAAGCG
CAAGCCGCTG CTCCGGCTCC GGCTCCGGTC GAAACCGCGG CTCCGGCTGT GGCAATCGAA
GCGCCTGTTG CTCAACCTGC ACGGCAGGCT GAGATCGTCG AACCGCAGCC GGTCGTGGCA
GCGGTCGCAC CGGCACCTGA ACCGGCTGCT GTCGAGCCGG CGCCCCTCGC CGTCGCACCG
CAAGCTGCGC CGCAAGCGCC GCGTCAAGCC GCCGTGTCGG CGGAAGCCCT GAAGCCGGTG
CTGGAACAAG CCGGCCTCGT CTGGGTGAAC ACCGACGCCG ACAAGCTGCG CGCGGCTCAG
GAAGTTGCTG CACAGACCGT CAAACCGGCT CGCGTGGCTC GCGAACGCAA GCCGCTGCCG
CCGCTCGACA GCGCGCCAAT GCAACAGGTG GAAACAGGCC AGCACCCGCA GTAA
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| Protein sequence | MKRMLFNATQ QEELRVAIVD GQKLIDIDIE TAGREQRKGN IYKGIITRIE PSLEACFVNY
GEDRHGFLPF KEVARQYFRD GVDMRSARIQ DALREGQELI VQVEKEERGN KGAALTTFIS
LAGRYLVLMP NNPRGGGVSR RIEGDDRQEL RETMAQLQLP EGMSIIARTA GIGRSAEELQ
WDLNYLMQLW RAIEAASQSG SSGQPMLIYL ESSLVIRAIR DYFQPDIGEI LIDTTEIHDQ
ARAFMDIVMP DNVSKVKRYH DDVPLFSRFQ IEHQIETAYS RTVPLPSGGA IVIDHTEALV
AIDVNSARAT KGADIEETAA RTNLEAADEV ARQLRLRDLG GLIVIDFIDM ESAKSQREVE
QRLKDALKHD RARVQMGKIS RFGLMELSRQ RLRPALSEGS HVTCPRCNGT GHIRDTESSA
LQVLRIIQEE AMKENTAAIH CQVPVEVTAF LLNEKRAEIN KIESRFKVNV VLIPNKHLDT
PHYKLERLRH DDARLDDPRA SWKMAEEAAR ELESETGYSK RTEEVKPKQE AAVKGITPEK
PAPSAPVRPV AAPAPVAVTP ASGGFIGWLK NLFGVQPAAP APVAPAATDK QARPQRGERT
ERGERTGERG GDRNRNRRTG TGTRDAAGRG EGTTGGRQAQ GQQPSQRREE REPREGRETR
EGREPREARE AREPRGNREP REAREGREPR EAREPREGRE NRDRDNRGAE RAETAEAAPR
GERQERGERR ERGERAERGE RRKPQTETAD ALTQSEAQTA EELVQNQTAL GENGAPIDQE
AVAREGEERR RRRRGRRGGR REREEDVNGN LAADVAEAEG DNASATDEAP VRTAHQPVER
KPEVVEAKDV TPVEVVVAAV ATQTAVVTEL HAATETPALA VEKAAKTETV VPVAEAPVAP
AVVEPVAETP VAQAAAEPVE AAQAAPAASE TVSLVEPVAR VEAPAHAHVE APAVAPVVEA
QAAAPAPAPV ETAAPAVAIE APVAQPARQA EIVEPQPVVA AVAPAPEPAA VEPAPLAVAP
QAAPQAPRQA AVSAEALKPV LEQAGLVWVN TDADKLRAAQ EVAAQTVKPA RVARERKPLP
PLDSAPMQQV ETGQHPQ
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