| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2921 |
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| Symbol | |
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| ID | 6281684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3299512 |
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| End bp | 3300537 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642622489 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_001896539 |
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| Protein GI | 187924897 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000900564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAGT TAGGCAAAAT ATCCCAGAAA TCGGTCGCAA GCGACCAGGT CTCGATGATC
GAGATCGACG ACAGCGCGGC CGGACAGCGC ATCGACAACT TCTTGTTGCG CGTCTGTAAA
GGCGTGCCAA AAAGCCATAT TTACCGCATC CTGCGCAGCG GGGAAGTGCG GGTGAATAAG
GGCCGGATAG ACGCGCAGTA CCGTCTCGAA CTAGGCGATC TGGTGCGAGT GCCGCCCATT
CGCGTCGCTC AACCGAGCGA AACGGCCACC CAGGCGCCGG TCCCGGCCGC CCATTTCAAG
ATTATTTTCG AAGACGAGCA CTTGCTCGTG ATCGATAAAC CGGCCGGCGT GGCGGTTCAC
GGCGGCAGCG GCGTCGCGTT CGGCGTGATC GAGCAAATGC GCGAGGCGCG TCCGCAGGCA
AAATTTCTCG AACTGGTGCA TCGGCTGGAT CGTGAGACGT CCGGCATTCT CATGCTCGCC
AAGAAGCGCT CGGCGCTCGT CAATCTGCAT GAGCAGATTC GCGAGAACAA GATGGACAAG
CGCTACTATG CTTGCGTTCA CGGCGACTGG GCGAGCGACT GGGGCCGCCG CCGCGCGGTC
AAGGAACCGC TGCACAAGTA TTTGACCGCC GACGGCGAGC GCCGCGTGCG CGTTCAGCCG
GACGGTCTCG CGTCGCACAC GGTGTTCAAC CTGATCGACC GCTGGCCGGA ATATGCGTTG
CTCGAGGCGG AACTGAAGAC CGGGCGCACG CATCAGATCC GGGTCCACTT GCAGCATCTG
GAACTGCCGA TCGTTGGCGA CGCCAAATAC GGCGACTTCG CGCTAAATAA GGCACTGGCG
CGGGCCAACG CCAAGCCTGG CCTGAAGCGC ATGTTCCTGC ATGCTTACCG GCTGAAGCTC
ACGCACCCGG CAACCGGCGC GCCGCTGCAG TTCGAGGCGC CGCTGCCTGC CGAATGCCGC
AGCTTCATTG CACAACTCAA CGAACTACGA AATGGGTCAC ACCCGGAGAC GGCACCGCAT
GGCTAG
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| Protein sequence | MKELGKISQK SVASDQVSMI EIDDSAAGQR IDNFLLRVCK GVPKSHIYRI LRSGEVRVNK
GRIDAQYRLE LGDLVRVPPI RVAQPSETAT QAPVPAAHFK IIFEDEHLLV IDKPAGVAVH
GGSGVAFGVI EQMREARPQA KFLELVHRLD RETSGILMLA KKRSALVNLH EQIRENKMDK
RYYACVHGDW ASDWGRRRAV KEPLHKYLTA DGERRVRVQP DGLASHTVFN LIDRWPEYAL
LEAELKTGRT HQIRVHLQHL ELPIVGDAKY GDFALNKALA RANAKPGLKR MFLHAYRLKL
THPATGAPLQ FEAPLPAECR SFIAQLNELR NGSHPETAPH G
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