Gene Bphyt_2890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2890 
Symbol 
ID6281416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3271000 
End bp3272193 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content68% 
IMG OID642622458 
Producthypothetical protein 
Protein accessionYP_001896508 
Protein GI187924866 
COG category[S] Function unknown 
COG ID[COG4394] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.780148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.230135 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCCG CTACGCCCCA ATCCGAGCAT GCTGCCGACG CGCCCACGGC AATCGCCTGC 
GATATCTTCT GTGCGGTGAT CGACAATTTC GGCGACATCG GCGTGTGCTG GCGGCTCGCG
CGCCAACTCG CGAGCGAACA CGGCTGGCAG GTGCGCGTGT TCGTCGACGA TCTGCACGCG
TTTCAGAAGC TGTGCCCATC GCTGACGTTA GAGCGCGCGC GCCAGACGGT GGGCGGCATC
GTCGTCGAAC ATTGGCACGA GCCGGCCCAT GCGGGCGATA CGCTCGAAGT CGCCGACGTC
GTGATCGAGG CGTTCGGCTG CGAACTGCCG CCCATTTATG TCGCCGCGAT GGCGGCGCGC
GAGCGCACGC CGGTGTGGTT CAACCTCGAA TATCTGAGCG CCGAGGATTG GGTGGCGGAT
TTCCATCTGC GGCCGTCGCC TCATCCGCGC TATCCGCTGA CCAAGACGTT CTTTTTCCCC
GGACTAGGCC CCGGCACCGG CGGCGTGCTG AAGGAACGGC ATCTCGACGG CGCGCGCGCG
GATTTTGAAG CGTCGCCCAG CGCGCGCGCG GCATGGTGGC GGCAAACCAC CGGCCACGCG
CCGCCGCCCG CCGCTGCCAC GGTCGTCTCG CTGTTCGCCT ATGAAAACCC CGCCGTCGAC
AGCCTGCTCG AACAATGGCG CGACAGCGCG GAGCCGGTCG CCCTGCTGGT GCCCGAAGGC
CGCATTTCAG GCGCGGTGGC GCGCTTTTTC GACCTCCCGG CGTTCGGCGC CGGCTCGCAT
GCGATGCGCG GCAATCTCAG CGCGCACGCC CTCGCCTTCA CCGACCAGCC CGGCTACGAC
GCGCTGCTGT GGGCGAGCGA AATCAATTTC GTGCGCGGCG AGGATTCGTT CGTGCGCGCG
CAGTGGGCCG CCAAACCGTT CGTCTGGCAC ATCTACCCGC AAGCCGACGA CGCCCATCTG
CCGAAGCTCG ACGCCGCGCT CGCGCACTAC GCGCGCACCC TGCCCGCCGA CGCCCGCGAC
GCGCTCGCGC GCTTCTGGCA CGCCTGGAAC GGCACGGGCC GGCCGGACTG GGCGCAATTC
CGGCATCACT TGCCGGCGCT CAGGCACCGC GCGGCGGCGT GGGCCGGAGA ACTGGCTCAA
GTGGGCGACC TCGCCGGAAA TCTGGCCTTG TTCGCAAAAA CTCAGTTAAA ATAA
 
Protein sequence
MSSATPQSEH AADAPTAIAC DIFCAVIDNF GDIGVCWRLA RQLASEHGWQ VRVFVDDLHA 
FQKLCPSLTL ERARQTVGGI VVEHWHEPAH AGDTLEVADV VIEAFGCELP PIYVAAMAAR
ERTPVWFNLE YLSAEDWVAD FHLRPSPHPR YPLTKTFFFP GLGPGTGGVL KERHLDGARA
DFEASPSARA AWWRQTTGHA PPPAAATVVS LFAYENPAVD SLLEQWRDSA EPVALLVPEG
RISGAVARFF DLPAFGAGSH AMRGNLSAHA LAFTDQPGYD ALLWASEINF VRGEDSFVRA
QWAAKPFVWH IYPQADDAHL PKLDAALAHY ARTLPADARD ALARFWHAWN GTGRPDWAQF
RHHLPALRHR AAAWAGELAQ VGDLAGNLAL FAKTQLK