| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2880 |
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| Symbol | |
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| ID | 6281041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3259232 |
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| End bp | 3260692 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642622445 |
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| Product | alpha,alpha-trehalose-phosphate synthase (UDP-forming) |
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| Protein accession | YP_001896498 |
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| Protein GI | 187924856 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0380] Trehalose-6-phosphate synthase |
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| TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.135882 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGAC TGATCATCGT ATCGAACCGG GTTGCGCCGA TCTCGGAGGG CGGCCCGGCG
GCGGGTGGTC TGGCGGTCGG CGTGTACGAC GCGCTGAAGG AAACCGGCGG CATGTGGTTC
GGCTGGAGCG GCGACGTGCT CAGCTCGGGC CAGCCGCAGA TCAAGGTCGA GGAGCGCGGC
CCGGTGACCT TCGCGACCAT CGCGCTGATG CGCCGCGATT ACGATCAGTA CTATCGTGGC
TTCTCTAACG CCACGCTGTG GCCCGCGTTC CACTATCGCG CCGATCTGGT GCAGTACGAC
CGGCACGACT TCGAGGGCTA CTGCCGCGTC AATGCGTGGC TCGCGCAACA GCTCGTGCCG
TTGCTGCGCG AAGACGACGT GATCTGGGTC CACGACTACC ATCTGATTCC GTTCGCGCAG
GCGCTGCGCG CGGCGGGCGT GAAGAACCGC ATCGGCTTTT TCCTGCATAT TCCGTTTCCG
GCTTCGCAGG TGTTGCTGGC GGTGCCGCCG CATCGAGAAC TCGTCGAAGC GCTGTGTTCG
TTCGATCTGC TCGGCTTCCA GACAGCGCCG GATCTGCGCG CGTTTTGCGA CTACATCGTC
AACGAGGCGA ACGGCTCGGT CGACGCATCG GCGAAAGGCC CGCTGATGAT CCACGCGTTC
GGCCGCACGC TGCGCGCGGC GGCGTATCCG ATCGGCGTCT ATCCGGACGA GATCGCCGAA
CTCGCGAAAG CGGGCGAGCG CGGCAAACCG GTGCGCACCA TGAAGGCGAC GCTGCATTCG
CGCAAGCTGA TCATGAGCGT CGACCGGCTC GATTATTCGA AGGGACTGGT CGAGCGGTTT
CGCGCCTTCG AGCGGCTGCT CGAACACGCG ACCGCGCAAC GCAACAAGGT GTCGTTTCTG
CAGATCGCGC CGCCAACGCG CGCCGACATG CACGCGTATC AGGACATCCG TTTGCAGCTG
GAAGGGGAGT CGGGGCGCAT CAACGGGCGC TTCGCCGAAC TGGACTGGAC GCCGATTCTC
TACATCCACA AGCAGTACGA GCGCTCGGTG CTGGCCGCGC TGTTCCGCAC CGCGCACGTC
GGCTATGTGA CGCCGTTGCG CGACGGCATG AACCTCGTCG CCAAGGAATA TGTGTCGGCG
CAGGATCCGG ACAATCCCGG CGTGCTCGTG CTGTCGCGCT TTGCCGGCGC CGCACAGGAG
CTGGACGGCG CGCTGATCGT CAATCCGGTC GATATCGACG GCATGGCGGA GGCGCTCGCG
CGGGCGCTCG ACATGCCGCT CGCGGAGCGT CAGGCGCGTC ATCGCGAAAT GATGGTGCAG
TTGCGCGAGA ACAATGTGTC GGTGTGGCGC GATAACTTCA TGCGCGATTT GCAGGGCGTC
GCTGGTGCAA AGAGCACCCG AAGCGGGAAA GCGCGCGCGG TGTCGGGGAA AAAAGCAGCG
CGCGAGACGC AGGCGGGGTA G
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| Protein sequence | MSRLIIVSNR VAPISEGGPA AGGLAVGVYD ALKETGGMWF GWSGDVLSSG QPQIKVEERG
PVTFATIALM RRDYDQYYRG FSNATLWPAF HYRADLVQYD RHDFEGYCRV NAWLAQQLVP
LLREDDVIWV HDYHLIPFAQ ALRAAGVKNR IGFFLHIPFP ASQVLLAVPP HRELVEALCS
FDLLGFQTAP DLRAFCDYIV NEANGSVDAS AKGPLMIHAF GRTLRAAAYP IGVYPDEIAE
LAKAGERGKP VRTMKATLHS RKLIMSVDRL DYSKGLVERF RAFERLLEHA TAQRNKVSFL
QIAPPTRADM HAYQDIRLQL EGESGRINGR FAELDWTPIL YIHKQYERSV LAALFRTAHV
GYVTPLRDGM NLVAKEYVSA QDPDNPGVLV LSRFAGAAQE LDGALIVNPV DIDGMAEALA
RALDMPLAER QARHREMMVQ LRENNVSVWR DNFMRDLQGV AGAKSTRSGK ARAVSGKKAA
RETQAG
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