Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2874 |
Symbol | |
ID | 6281903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 3250319 |
End bp | 3251053 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642622438 |
Product | DNA polymerase III subunit epsilon |
Protein accession | YP_001896492 |
Protein GI | 187924850 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family [TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0167654 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.331291 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTCAAC TCATCCTCGA TACCGAAACC ACCGGCCTGA ATGCCCGCAC CGGCGACCGG ATTCTTGAAC TCGGTTGCGT CGAAATGGTG AACCGCCGGC TGACGGGCAA CAATCTGCAC TTCTATATCA ACCCGGAACG CGAGAGCGAT CCGGGCGCGC TGGCTGTGCA CGGACTGACC ACCGAGTTCC TGAGCGACAA GCCGAAATTC GCCGAGATCG CCGATCAGTT TCGCGACTTC ATCCAGGACG CGGATCTGAT CATCCACAAC GCACCGTTCG ATATCGGCTT TCTCGATGCC GAATTCGCCT TGCTGGGTTT GCCGCCGGTG AAAACCTACT GCGGCGAAAT CATCGATACG CTGGCGCGCG CCAAGCAGAT GTTCCCCGGC AAGCGCAATT CGCTTGACGC ACTGTGCGAC CGCTTCGGCA TCAGCAACGC GCACCGAACG TTGCACGGCG CCCTGCTCGA CTCGGAACTG CTCGCCGAGG TCTATCTGGC GATGACGCGC GGCCAGGAAA GCCTTGTCAT CGACATGCTC GGCGAGTCGC ACGCCGGCGG CGACGCGCAT GCGCCGCGCG TCGCGCTCAG TTCGCTCGAT CTGATCGTGG TCACCGCCAG CGACGACGAG CTCGCCGCGC ACCAGGCGGT ACTCGACGGC CTCGACAAGG CGATCAAGGG CACGAGCGTG TGGCGCCTTG AACCGGCGCC GGCTGCGGAT GAGCAAACCG CTTAA
|
Protein sequence | MRQLILDTET TGLNARTGDR ILELGCVEMV NRRLTGNNLH FYINPERESD PGALAVHGLT TEFLSDKPKF AEIADQFRDF IQDADLIIHN APFDIGFLDA EFALLGLPPV KTYCGEIIDT LARAKQMFPG KRNSLDALCD RFGISNAHRT LHGALLDSEL LAEVYLAMTR GQESLVIDML GESHAGGDAH APRVALSSLD LIVVTASDDE LAAHQAVLDG LDKAIKGTSV WRLEPAPAAD EQTA
|
| |