| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2862 |
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| Symbol | |
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| ID | 6281034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3234940 |
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| End bp | 3236829 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642622426 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_001896480 |
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| Protein GI | 187924838 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.198246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACAACA ATATGTTTTC GAAAGCAGCA GTGTGGCTGG TTATCGCACT GGTGCTGTTT
ACGGTGTTCA AGCAGTTCGA CAAGCCCCGT GTCCAGGAAG GCGTTTCCTA TTCGCAGTTC
ATGGACGACG CGAAGAACGG CAAAGTCAAG AACGTCATTG TCCAGGGGCG GAACCTCACG
GTCACTCCAG CAGACGGCCA GAAGTACCAG ATCGTGTCGC CCGGCGACAT CTGGATGGTC
GGCGATCTGA TGAAGTACGG CGTTCAGGTG AGCGGCAAGG CTGATGACGA ACCCAATGCG
CTGGTGTCCG CGCTGTACTA CCTCGGGCCG ACGATCCTGA TCATTGGTTT CTGGTTCTAC
ATGATGCGAC AGATGCAGGG GGGCGGGAAA GGTGGTGCGT TCTCGTTCGG TAAATCCCGT
GCACGTCTGA TCGACGAAAA CAATAACGCA ATCAATTTCA CCGACGTCGC CGGTTGCGAC
GAAGCCAAGG AAGAAGTCTC CGAACTGGTC GACTTCCTGC GCGATCCGCA GAAATTCCAG
AAGCTGGGTG GTCGCATTCC GCGCGGCGTG CTGCTGGTCG GGCCGCCGGG AACCGGTAAG
ACGTTGCTGG CGCGCGCCAT CGCCGGTGAG GCGAAAGTGC CGTTCTTCAG CATCTCGGGT
TCGGACTTCG TCGAAATGTT CGTCGGTGTC GGCGCGGCTC GTGTGCGCGA CATGTTCGAG
CAGGCCAAGA AGCATGCACC GTGCATCGTG TTCATCGACG AAATCGATGC GGTTGGCCGT
CATCGTGGCG CCGGTATGGG CGGCGGTAAC GACGAGCGCG AACAGACCTT GAACCAGATG
CTGGTCGAGA TGGACGGCTT CGAAGCGAAC TCAGGCGTGA TCGTGATTGC TGCAACGAAC
CGTTCGGACG TCCTCGACAA GGCGCTTCTG CGTCCGGGCC GTTTCGACCG CCAGGTGTAT
GTCGGTCTAC CCGATATTCG CGGCCGTGAG CACATCATGA AGGTTCACCT GCGCAAGGTG
CCGATTTCGA ACGACGTCGA CGCAGCGGTG ATCGCACGCG GCACGCCGGG CTTCTCCGGC
GCCGACCTCG CGAACCTGGT GAACGAAGCA GCTTTGTTCG CGGCTCGCCG CGGCAAGCGC
ATCGTCGAAA TGAACGACTT TGAAGATGCG AAGGACAAGA TTTTCATGGG TCCGGAGCGC
AAGTCGGCCG TGATCCGCGA AGAATCGAAG CGCGCTACGG CGTACCACGA GTCGGGTCAT
GCGGTGATCG CGAAGCTGTT GCCGAAGGCC GATCCGGTGC ACAAGGTCAC GATCATTCCG
CGTGGCCGTG CATTGGGCGT GACGTGGCAG TTGCCGGAGC ATGACAACGA AACGTATTCG
AAGGACTACC TGCTGGATCG TCTCGCGATT CTGTTCGGTG GCCGCGTCGC GGAAGAGCTG
TTCCTGAACC TGCTCAGCAC CGGCGCGTCG GACGACTTCA ACAAGGCGAC GCAAACCGCG
CGCGCCATGG TGGCTCGCTT CGGCATGACG GACGCACTCG GACCGATGGT CTACGTCGAC
GACGAGAACG ACGCCACGCC GTTTGGCCGC GGCTTCACGC GCACCATTTC GGAAGCGACG
CAGCAGAAGG TCGATGCTGA AATCCGTCGC GTGCTGGATG AGCAGTACAA CCTCGCGAAG
CGCTTGCTGG ACGAGAACCG CGATAAGGTC GAGGCGATGA CCGCCGCACT GATGGAGTGG
GAAACGATCG ACGCCGATCA GATCAACGAC ATCATGGCAG GCCGTCCGCC ACGTTCGCCG
AAGAGCTCGC CGCCGTCGGC AACCGACGCC TCCTCGGGCG GCAGCCCGGG CACCGAGGTC
AAGCCGGGCA GCGCAACGGC GCCGGCCTGA
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| Protein sequence | MNNNMFSKAA VWLVIALVLF TVFKQFDKPR VQEGVSYSQF MDDAKNGKVK NVIVQGRNLT
VTPADGQKYQ IVSPGDIWMV GDLMKYGVQV SGKADDEPNA LVSALYYLGP TILIIGFWFY
MMRQMQGGGK GGAFSFGKSR ARLIDENNNA INFTDVAGCD EAKEEVSELV DFLRDPQKFQ
KLGGRIPRGV LLVGPPGTGK TLLARAIAGE AKVPFFSISG SDFVEMFVGV GAARVRDMFE
QAKKHAPCIV FIDEIDAVGR HRGAGMGGGN DEREQTLNQM LVEMDGFEAN SGVIVIAATN
RSDVLDKALL RPGRFDRQVY VGLPDIRGRE HIMKVHLRKV PISNDVDAAV IARGTPGFSG
ADLANLVNEA ALFAARRGKR IVEMNDFEDA KDKIFMGPER KSAVIREESK RATAYHESGH
AVIAKLLPKA DPVHKVTIIP RGRALGVTWQ LPEHDNETYS KDYLLDRLAI LFGGRVAEEL
FLNLLSTGAS DDFNKATQTA RAMVARFGMT DALGPMVYVD DENDATPFGR GFTRTISEAT
QQKVDAEIRR VLDEQYNLAK RLLDENRDKV EAMTAALMEW ETIDADQIND IMAGRPPRSP
KSSPPSATDA SSGGSPGTEV KPGSATAPA
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