| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2844 |
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| Symbol | |
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| ID | 6283934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3215066 |
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| End bp | 3216433 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642622407 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001896462 |
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| Protein GI | 187924820 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.94035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.605375 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCGAAG CCACGCGCGA CGCTAACACG TCGGCAGCGG CACCCGCCGT TCCCGTGCGC
TGGCACCGCA GGGTGCTCGC GCTGGCGTTT CCCATCGTTC TCGCCAATCT GACGCAGCCG
ATTCTCGGCG CGGTCGATAC CGCCGTCGCG GGCCATCTGG ATGGCGCTTC GTATCTCGGC
GGCGTGGCGC TCGGCGGTCT GTTCTTCAAC TTCGTGTTCT GGGGCTTCGG CTTTCTGCGC
ATGGGCACGA CCGGACTGGT CGCGCAATCG CACGGTGCGC GCGACCACGC GGAGTTGCGC
AACACCGTCG TACGCGCGCT GTTGCTGGCG GCCGCGATCG GCGCCGTGGT GCTGGCACTG
CAAATGCCGC TGATCGATTA CGCAGTGCGC GTGATCGGCG GCAGCGACGC GGTGCAACGC
AACGCGCGGC TCTATTGTCA CGCGCGCATC TGGGCCGCCC CGCTCGCCCT CGGCAACTAT
GTCGTGCTCG GCTGGCTGCT CGGCACGCAG CAGGTGCGGC TCGCGCTTCT CTCGCAGGTG
TTCATCAACA GCGTGAACAT CGTGGCCGTA CTCCTGTATG TGTATCGGTT CGACTGGGGT
GTAGCCGGCA TCGGCGCGGC CACGGCCACC GCCGACGCGC TCGGTTTCGT GCTCGGCGCC
GCCCTGCTAT GGCGCGGCAG GCCACGCGGC TTGCCTGGCC TCAACCGCGC CGCGCTGTTC
GACGCAGCGG CGCTCAAGCG GCTCGTGGTG CTCAATCGCG ACATCTTCGT GCGCACCTTG
TGCCTGCTCT CCTCGTTCGG CTGGTTTGCA CACCTGGGCG CGAAGCAAGG CGACGCCACG
CTCGCCGCCA ACGCGCTGCT GCTCAATTTT CAGACGTTCA TGGCCTACGG ACTCGACGGT
TTCGCGCACG CCGCCGAAGC GCTCGTCGGT GCGGCGATCG GCGCGCGCGA CCGGCACGCT
TTCGCGCAGG CGATCAAGGT GACGGCGTTG TGGTCCACGC TCGGCGCGCT GGCATTTTCG
CTGGCGTATT GGGGCGCGGG CTCGTGGATC GTCGAACGTC TGACGGATCA GGCCGCCGTA
CGCGCCACCG CCGAAATGTA TCTGCCTTGG GCCGCGCTCT CGCCGGTGGT GTCCGTGTTG
GGCTTTCTGC TCGACGGCGT GTTCATCGGC GCGACTCGCA CGCGCGAACT CATGATGTCG
ATGGTGGTGT CGTTCGCGTT GTTCGTCGTG GCGTCGTGGG CCTTGCTGGC GCTGTACGGC
AATCACGGCT TGTGGGCCGC GATGCTGCTC TTCATGGCGC TGCGTGGTCT CACGCTTGCG
CGTTACGTGC CGGGCGTCGT GCGCGGCATG GCGAGCGCGG CGGCTTGA
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| Protein sequence | MSEATRDANT SAAAPAVPVR WHRRVLALAF PIVLANLTQP ILGAVDTAVA GHLDGASYLG
GVALGGLFFN FVFWGFGFLR MGTTGLVAQS HGARDHAELR NTVVRALLLA AAIGAVVLAL
QMPLIDYAVR VIGGSDAVQR NARLYCHARI WAAPLALGNY VVLGWLLGTQ QVRLALLSQV
FINSVNIVAV LLYVYRFDWG VAGIGAATAT ADALGFVLGA ALLWRGRPRG LPGLNRAALF
DAAALKRLVV LNRDIFVRTL CLLSSFGWFA HLGAKQGDAT LAANALLLNF QTFMAYGLDG
FAHAAEALVG AAIGARDRHA FAQAIKVTAL WSTLGALAFS LAYWGAGSWI VERLTDQAAV
RATAEMYLPW AALSPVVSVL GFLLDGVFIG ATRTRELMMS MVVSFALFVV ASWALLALYG
NHGLWAAMLL FMALRGLTLA RYVPGVVRGM ASAAA
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