| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2811 |
|---|
| Symbol | |
|---|
| ID | 6281656 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 3179210 |
|---|
| End bp | 3180127 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642622373 |
|---|
| Product | Xylose isomerase domain protein TIM barrel |
|---|
| Protein accession | YP_001896429 |
|---|
| Protein GI | 187924787 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.279544 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.182339 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCTT TCGACGTACG TATCGGCATC AATCCGCTCT CGTGGATGAA TGACGATCTG
CCTTCGCTCG GCGGCGAGAC GCCGCTCGAA GTGGCGCTGA CGGAAGGCCG CGAGATCGGC
TATCAAGGCT TCGAACTCGG CAACAAGTTT CCACGTGAAC CGCAGGCGTT GAAGTCGCTG
CTCGCGCAAT ACGATCTCGC GCTCGTCTCC GGCTGGTATT CCGGACGCCT CGCGCGACGC
AGCGTCGAAG AAGAAATCGC GGAGGTCGGC CCGCATCTCG AACTACTCGC GCAAAACGGC
GCGACGGCGA TGGTGTACGG TGAGGTTGCC GATTCGATTC AGGGCGCAGC GCAACCCCTT
TACCAGCGCC CGCGCTTTTT CAGCGAGAAG CAATGGGCCG ACTATGCGGC CCGTGTCGAC
GAATTCGCAC GTTATACGCT GAGCCGCGGC GTGCGGCTCG CCTATCATCA CCACATGGGC
GCCTATGTCG AAACGCCTGC CGATGTAGAC CAACTGATGG CGCGCACCAG CGACGCCGTT
GGCCTGCTGT TCGACGCGGG ACACATCACG TTTGCCGGTG GCGATCCGCT CGCCGTGCTC
GACAAACATA TCGGGCGCGT TTGCCACGTG CATTGCAAGG ACGTGCGCCC CGCCGTCATG
AAGCTCGCGC GCAATCGCAA CTGGAGTTTT TTGGACGCGG TCATCGCCGG CGCCTTCACG
GTGCCGGGCG ACGGCGCGGT GAATTTCCCC GCGATCATCG AGCGCCTGAA GCGGCACGGT
TATTGCGGCT GGCTGGTGGT GGAAGCCGAA CAGGATCCGG TCGTGGCGCC GTCGTTCGAG
TACGCGCAGA AAGGCTACAA GACGTTGCGC GCGCTGGTCG ATGCGCCGCT CGACGGCACA
GAGCAGGAGG CAGCATGA
|
|---|
| Protein sequence | MTAFDVRIGI NPLSWMNDDL PSLGGETPLE VALTEGREIG YQGFELGNKF PREPQALKSL
LAQYDLALVS GWYSGRLARR SVEEEIAEVG PHLELLAQNG ATAMVYGEVA DSIQGAAQPL
YQRPRFFSEK QWADYAARVD EFARYTLSRG VRLAYHHHMG AYVETPADVD QLMARTSDAV
GLLFDAGHIT FAGGDPLAVL DKHIGRVCHV HCKDVRPAVM KLARNRNWSF LDAVIAGAFT
VPGDGAVNFP AIIERLKRHG YCGWLVVEAE QDPVVAPSFE YAQKGYKTLR ALVDAPLDGT
EQEAA
|
|---|
| |