| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2799 |
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| Symbol | valS |
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| ID | 6284229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3162339 |
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| End bp | 3165218 |
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| Gene Length | 2880 bp |
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| Protein Length | 959 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642622361 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_001896417 |
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| Protein GI | 187924775 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.462967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.19296 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGA CCCCGAGCGA CACCACCTCC ACGCTTGCCA AAAGCTTCGA GCCCCACACC
ATCGAAGCCC ACTGGGGCCC CGAATGGGAA AAGCGCGCCT ACGCGACGCC CGTCATCGAC
GAAAACCGGA AAGATTTCTC GATCCAGCTG CCGCCGCCGA ACGTCACGGG CACCCTCCAC
ATGGGCCATG CGTTCAACCA GACCATCATG GACGGCCTCG CCCGCTATCA CCGCATGCTC
GGCGAAAACA CCCTGTGGGT GCCGGGCACG GACCACGCGG GCATCGCCAC GCAGATCGTC
GTCGAGCGGC AACTGGACGC GCAAGGCGTC TCGCGCCACG ACCTCGGCCG TGAAAAATTC
GTTGAACGCG TCTGGGAGTG GAAACAGGAA TCCGGCTCGA CCATCACAAA CCAGGTGCGC
CGCCTCGGCG CCTCGATCGA CTGGTCGCGC GAATACTTCA CGATGGACGA CAAGATGTCG
GCCGCCGTGC GCGACGTCTT CGTGCGTCTG TATGAACAGG GCCTGATCTA TCGCGGCAAG
CGCCTCGTGA ACTGGGACCC GGTGCTGCTC ACCGCCGTCT CCGATCTTGA AGTGGTCAGC
GAAGAAGAAA ACGGCTCGCT GTGGCACATC CAGTACCCGC TCACCGACGG CTCGGGCCAT
CTGACGGTCG CCACCACGCG CCCGGAAACC ATGCTCGGCG ACACCGCCGT GATGGTCCAC
CCGGAAGACG AGCGCTACGC GCACCTGATC GGCAAGACGG TCACACTGCC GCTATCGGGC
CGCGAAGTGC CGATCATCGC AGATGATTAT GTCGACCGCG AGTTCGGCAC CGGCGTCGTC
AAGGTTACGC CCGCGCACGA TTTCAACGAC TACCAGGTCG GTCTGCGCCA CAAGCTGCCG
ATGATCGAAA TCCTCACGCT CGACGCGAAG ATCAACGACA ACGCGCCGGA AAAATACCGC
GGCCTAGACC GTTTCGACGC CCGCAAGCAG GTGGTGGCCG ACCTCGAAGC GCTCGGCGTG
CTCGAATCGG TCAAGCCGCA TAAGCTGATG GTGCCGCGCG GCGACCGTAC GGGCGTCGTG
ATCGAGCCGA TGCTGACGGA CCAATGGTTC GTCGCCATGA GCAAGCCGGC GCCGGAAGGC
ACCTTCAATC CGGGCAAATC GATCGCCGAA ACCGCGCTAG ACGTGGTGCG CAGCGGCGAA
ATCAAGTTCG TGCCGGAAAA CTGGACCACC ACTTACTATC AGTGGCTCGA AAACATTCAG
GACTGGTGCA TCTCGCGCCA ACTCTGGTGG GGCCACCAGA TCCCGGCGTG GTACGGCGAA
AACGGCGAAA TCTTCGTCGC GAAGACCGAG GAAGACGCGC GCGCCAAGGC CGCGGCGGCC
GGCTATACGG GCGCGCTCAG GCGCGACGAA GATGTGCTCG ACACCTGGTT CTCGTCTGCT
CTGGTGCCGT TCTCGTCGCT CGGTTGGCCG AATGAAACCC AGGAGTTGAA GCACTTCCTG
CCGTCGTCGG TGCTGGTCAC CGGCTTCGAC ATCATCTTCT TCTGGGTCGC GCGCATGGTC
ATGATGACCA CGCACTTCAC CGGCAAGGTG CCGTTCGATA CGGTGTACGT GCACGGTCTC
GTGCGCGACG CCGAAGGCCA GAAGATGTCG AAGAGCAAGG GCAACACGCT CGACCCGATC
GATATCGTCG ACGGCATCGG CCTCGACGCG CTGGTCGCCA AGCGCACCAC CGGCCTGATG
AACCCGAAGC AGGCCGCGTC GATCGAAAAG AAAACCCGTA AGGAATTCCC CGACGGCATC
CCCGCGTTCG GCACCGACGC GCTGCGCTTC ACGATGGCCT CGATGGCCAC GCTCGGGCGC
AACGTCAACT TCGACCTGGC GCGCTGCGAA GGCTATCGCA ACTTCTGCAA CAAGCTGTGG
AATGCCACCC GTTTCGTGCT GATGAACTGC GAAGGCCACG ATTGCGGTTT CGGCAAACCG
GAACAATGCG GCGAATGCGG TCCGGACGGA CACTTGCATT TCTCGCAGGC CGACTTCTGG
ATCGTCTCGC GTCTGCAGCG CGTGGAAGCG GAAATCGCCA AGGGTTTCGC CGACTATCGT
TTTGACAATG TGGCCAACGC CCTATACAAG TTCGTATGGG ACGAATACTG TGACTGGTAT
CTGGAGCTCG CGAAGGTTCA GATCCAGACG GGTCAGCCGA ACCAGCAGCG CGCAACTCGC
CGTACTCTGC TGCGCGTGCT CGAGACGGTG CTGCGGTTGG CGCACCCGGT GATTCCGTTC
ATTACCGAGG CGCTGTGGCA AAAAGTGGCG CCGTTGGCCG GGCGTTACCC CGAAGGCAAG
GCCGAGGGCG AAGCGTCCAT CATGGTGCAG CCTTACCCCG TCGCCGAACC GTCGAAGATC
GATGAAAACG CGGAACAGTG GGCGGCCGAT CTGAAAGCAG TGATCGATGC GTGCCGGAAT
CTGCGCGGCG AAATGAATCT GTCGCCGGCG GTCAAGGTGC CGTTGCTCGC TACCGGCAAC
GCGGAGCGCC TGCGCACCTT TGCTCCGTAC GCGCAGGCAT TGGCCCGTTT GTCCGAAGTG
CAGATCATTG CCGACGAGGC AACGCTGGAT GCGCAGGCAG ATGGCGCGCC AATTGCTATC
GTGGGGAATG ACAAGCTCGT GCTGAAGGTG GAAATCGATG TGGCAGTGGA GCGCGAGCGG
TTGTCGAAGG AGATTGCGCG GTTGAGTACG GAAATCGTCA AGTGCAGCGG AAAACTGCAG
AATGAGAGTT TCGTTGCAAA GGCACCGCCG GCAGTCGTTG AGCAGGAGCA GAAAAGACTG
GCGGAATTCG AAGCGACGGT GGGCAAGCTG AAAGCCCAAC TGGCGCGCTT GCCGGCTTGA
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| Protein sequence | MSETPSDTTS TLAKSFEPHT IEAHWGPEWE KRAYATPVID ENRKDFSIQL PPPNVTGTLH
MGHAFNQTIM DGLARYHRML GENTLWVPGT DHAGIATQIV VERQLDAQGV SRHDLGREKF
VERVWEWKQE SGSTITNQVR RLGASIDWSR EYFTMDDKMS AAVRDVFVRL YEQGLIYRGK
RLVNWDPVLL TAVSDLEVVS EEENGSLWHI QYPLTDGSGH LTVATTRPET MLGDTAVMVH
PEDERYAHLI GKTVTLPLSG REVPIIADDY VDREFGTGVV KVTPAHDFND YQVGLRHKLP
MIEILTLDAK INDNAPEKYR GLDRFDARKQ VVADLEALGV LESVKPHKLM VPRGDRTGVV
IEPMLTDQWF VAMSKPAPEG TFNPGKSIAE TALDVVRSGE IKFVPENWTT TYYQWLENIQ
DWCISRQLWW GHQIPAWYGE NGEIFVAKTE EDARAKAAAA GYTGALRRDE DVLDTWFSSA
LVPFSSLGWP NETQELKHFL PSSVLVTGFD IIFFWVARMV MMTTHFTGKV PFDTVYVHGL
VRDAEGQKMS KSKGNTLDPI DIVDGIGLDA LVAKRTTGLM NPKQAASIEK KTRKEFPDGI
PAFGTDALRF TMASMATLGR NVNFDLARCE GYRNFCNKLW NATRFVLMNC EGHDCGFGKP
EQCGECGPDG HLHFSQADFW IVSRLQRVEA EIAKGFADYR FDNVANALYK FVWDEYCDWY
LELAKVQIQT GQPNQQRATR RTLLRVLETV LRLAHPVIPF ITEALWQKVA PLAGRYPEGK
AEGEASIMVQ PYPVAEPSKI DENAEQWAAD LKAVIDACRN LRGEMNLSPA VKVPLLATGN
AERLRTFAPY AQALARLSEV QIIADEATLD AQADGAPIAI VGNDKLVLKV EIDVAVERER
LSKEIARLST EIVKCSGKLQ NESFVAKAPP AVVEQEQKRL AEFEATVGKL KAQLARLPA
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