| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2781 |
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| Symbol | |
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| ID | 6283419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3137378 |
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| End bp | 3139192 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642622343 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_001896399 |
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| Protein GI | 187924757 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.193053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGTCTC CGGTACAGAA AGGGATCGCC GCAGCCGCGG TTCTTACGAT CCTATTAACA
ATCGCCGGCT GTGCAAGTAC CGGAGGCGTT GCGCCGCAGG CCAGCGGAAT CGAACCCGCT
TCGCTCGACG CGGGCAACGC GATCCGCGCC GCCAACGCGG ACGCCCAATG GCCCGCGCTC
GACTGGTGGC GCGCCTATAA CGATCCGCAA CTGAACCAGT GGATCGAAGA CGCGCAAGCG
GGCAACCCGA GCCTCGCGGC CGCCCAGGCG CGCGTGCGCG AAGCCATGTC GATGGCCGGC
GTCGCCCGCT CGGCGTTGTC GCCGCAAGTC AACGGCAGCC TGTCGATCCA GCGCCAGAAG
TGGGCCGACA ACCTTTATTA CGGCCCGGGA CCGCTGGCCG GCGAGCAGTC GTGGAACAAC
ACCGGCACGC TCGGCCTGTC GTATCACCTC GACATCTGGG GCAAGGACAA GAACGCCGCA
GAGCGCGCGC TCGACGCCGC GCACGCGAGT TCGGCCGATG CGCGCGCCGC CCAGCTCGAA
CTGGAAGGCA ACGTGGTGCG CACGTACATC GAGATGTCGC TGAACTACGC GCTGCTCGAT
ATCGCCAAGG CCACCTTGCA GCAACAGCAG CAGATCGTGG ATCTGGCCAA CCGGCGTCTG
AAAGGCGGCA TCGGCACGCA GCTCGAAGTG AGCCAGGCCG AAACGCCGCT GCCGGAATAC
GAACGCCAGA TCGACGAAAT CGAAGAGAAG ATCGCGCTCG GCCGCAATCA GCTGGCGGCG
CTGGCCGGCA AAGGTCCGGG CGCGGGCGAT TCGATCCAGC GTCCGAGCCT GTCGCTCCAG
ATGGGGCCGG CCGGTCTGCC GAGCGCCTTG CCCGCGGACC TGATCGGCCA TCGGCCGGAC
GTGGTCGCGG CGCGCTGGAC CGTCGCGGCG CAAGCGCGCG GCATCGACGT CGCCAAGGCC
GATTTCTATC CGGACATCAA CCTGCTGGCG TCGATCGGCG GTTATGCGGC GATGGGGCCG
CTGTTCCAGT TCCTGAAGAA TCCGTCGCAT AGCTGGAGCG CGGGGCCGGC GCTGTCGCTG
CCGATCCTCG ACGGCGGACG GTTGCGTTCG CAACTCGGCG CGGCGTCGGC GGGCTATGAC
GAAGCCGTCG AGCGCTATAA CCAGTCGATT GTCGGCGCGC TCAAGGACAT TTCCGATCAG
GTGATCCGCA TCCGTTCGCT CGCCACTCAA GCCGACGACG CCGACCGTTC GGTCGCGGCG
GCCCGCAAGA ATTACGATCT GTCGCGCGAA GGATATCGGC GCGGCCTGAC TGACTACCTC
AACGTGCTGA TCGCGCAGAA TCAGTTGCTG CGCGCGCAGG AAGGGGTCGC GAAGATTCAG
GCCGAACGGC TGGGCGCGCA TGCGTCGCTG GTCACCGCGT TGGGCGGTGG ACTCGACGAC
CCGGCTAACG GTCCGCAGGC GAATGAGACG TTGCCGGCGC ATGGGAAGGG GAAAGCGGCG
GGTTCGGCCG TTGGCGGTTT GCCGGCGAAT GGGGCGGCGG GTTCCAGCGC TGGGTCGATT
TCGGCGAACA CGGCGGTGAA GTCGAGCGCT GGGGCGATGT CCGCGAACAC GGCGGTGAAG
TCGAGCGCTG GGTCGATGCC GGCGAACACG GCGGCGAAGC CGAGCGCTGG GGCGATGTCG
GTGAACACGG CGGCGAACTC GAACACTCTG TCCACGTCGC CAACGACACC AGCGAATTCA
CGCGCCGGAT CAATACCCGC AAACGCGTCG GCGAGCACAA ATGCCGCTCC CCGGTCGGCT
AAGTCGGGAA GCTGA
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| Protein sequence | MQSPVQKGIA AAAVLTILLT IAGCASTGGV APQASGIEPA SLDAGNAIRA ANADAQWPAL
DWWRAYNDPQ LNQWIEDAQA GNPSLAAAQA RVREAMSMAG VARSALSPQV NGSLSIQRQK
WADNLYYGPG PLAGEQSWNN TGTLGLSYHL DIWGKDKNAA ERALDAAHAS SADARAAQLE
LEGNVVRTYI EMSLNYALLD IAKATLQQQQ QIVDLANRRL KGGIGTQLEV SQAETPLPEY
ERQIDEIEEK IALGRNQLAA LAGKGPGAGD SIQRPSLSLQ MGPAGLPSAL PADLIGHRPD
VVAARWTVAA QARGIDVAKA DFYPDINLLA SIGGYAAMGP LFQFLKNPSH SWSAGPALSL
PILDGGRLRS QLGAASAGYD EAVERYNQSI VGALKDISDQ VIRIRSLATQ ADDADRSVAA
ARKNYDLSRE GYRRGLTDYL NVLIAQNQLL RAQEGVAKIQ AERLGAHASL VTALGGGLDD
PANGPQANET LPAHGKGKAA GSAVGGLPAN GAAGSSAGSI SANTAVKSSA GAMSANTAVK
SSAGSMPANT AAKPSAGAMS VNTAANSNTL STSPTTPANS RAGSIPANAS ASTNAAPRSA
KSGS
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