Gene Bphyt_2676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2676 
Symbol 
ID6281397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3022986 
End bp3024215 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content64% 
IMG OID642622237 
Productputative exported lipoprotein 
Protein accessionYP_001896295 
Protein GI187924653 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3317] Uncharacterized lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.439615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATC TTCGTCTTAC CAAGCGGTTT GCAGTAATGC TGATGGCAGG CGGTCTGGTC 
GCCGGCTGCG GCACGTCGTC GCCGACCAAA GTCGACTACA AGAGCGACTC GAAATCGAAG
CAGGTGTCAC TTGCCGTACC GCCGAACATG ATCGATGAGA CGGCCGATCA GCGTTCGTTG
CCCCCGCAGG GCGGCGAAAC CTCGTTGTCC ACGCTCAAGC AGGTTCAGGC GCAAGCGCCG
TCGGCCAATT CCGTGGTGGT GGCGCCGGCG GTCAACGGCA TGCATATCCA GCGCGACGGC
ACGGAAAGCT GGCTCGTCAT CGACAACAAG GCGCCCGAGC AGGCATGGCC GCAGATTCGC
CGCTTCTGGC AGGAACAGGG CTTCCTGCTG GTGGTCGACC AGCGCGACAA GGGCGTGATG
GAAACCGACT GGAACGAAAC GCACGCGCAG ATCAACGAAG GCCTGATCCG CAATACGCTG
TCCAAGGCCA TGGGCAACAG CTACGTGACC TCGGAACGCA ACAAGTACCG CACGCGTCTG
GAAGCGGCGC CGAACGGCGG CACGTACGTG TTCGTCAGCC AGAAGGGCAT GCGTGAGGCG
CTGACCGGCA CGAACAACGA CTCGAGCACG TGGGTGGCGA AGCCGAACGA TCCGGGCCTC
GAGCAGGAAT ATCTGAAGCG TCTGATGGCG GCGCTGGCAC TGGCCGATTC GCGCTCGAAA
CCGGCTGACG CGCAAAACGC CGACCTGTCG GCCGGCGCGC AGACGGCGCC GAACGCGGCC
ACTGCGGGCG CCAAATCGGC GGCTGCGGCC ACGGCGGCGC AAAACGTCTC GCTGTCCGCC
CAGCAACCCT TGCCGGCTGC GGACGCGAAC GGCACCGAAG CCCAACTGTC GTCGACGGAA
CTCACGCTCG GCGAGCCGTA CGACCGCGCC TGGTTGCGCG TGGGCCTCGC GCTCGACCGC
AGCAACTTCA CCGTCGACGA CCGCGACCTG ACCCGTGGCC TGTACTTCGT GCGCTATGTC
GATCCGAAGG ACATGACATC GGCGGAACAG GGCTTCTGGA GCCAGGTTTT CCACGGCAGG
AAGGAAAAAG TTGCCAAGCA GTACATGGTG AACGTGCGCG CGGTGACGCC TAACCAGACG
CGCGTGGCCG TGGTCGACGA CAAGGGTACG ATTGACCAGA GCCCGCAGGC CAAACAGATC
ATGAGTCTGA TGGCCGACCA GTTGCACTGA
 
Protein sequence
MTDLRLTKRF AVMLMAGGLV AGCGTSSPTK VDYKSDSKSK QVSLAVPPNM IDETADQRSL 
PPQGGETSLS TLKQVQAQAP SANSVVVAPA VNGMHIQRDG TESWLVIDNK APEQAWPQIR
RFWQEQGFLL VVDQRDKGVM ETDWNETHAQ INEGLIRNTL SKAMGNSYVT SERNKYRTRL
EAAPNGGTYV FVSQKGMREA LTGTNNDSST WVAKPNDPGL EQEYLKRLMA ALALADSRSK
PADAQNADLS AGAQTAPNAA TAGAKSAAAA TAAQNVSLSA QQPLPAADAN GTEAQLSSTE
LTLGEPYDRA WLRVGLALDR SNFTVDDRDL TRGLYFVRYV DPKDMTSAEQ GFWSQVFHGR
KEKVAKQYMV NVRAVTPNQT RVAVVDDKGT IDQSPQAKQI MSLMADQLH