| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2639 |
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| Symbol | |
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| ID | 6283289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2985745 |
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| End bp | 2987178 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642622199 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_001896258 |
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| Protein GI | 187924616 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.147714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAACTGT ACGAAAAACT CGCCGATGAA ATGACCGAAG CCGTGCGCCG CGGCGTGTTC
GCGGCGGGCG AGCGGATTCC GTCCGTGCGG CAGGCGAGCC AGCAGCATGG CGTGAGTATC
AAGACCGTGT TGCACGCGTA CGCGTTGCTG GAAAGCCGGG GGATTGTCGA AACGCGGCCG
CAGTCGGGCT ATTTCGTGCG CGACGCGGTG GCGCGGGCCG TGGCGCTCGA CGAGCCGCGG
CCCGGCCGTC TTTTGACGCC GCACACACCG CCGGTGGCCG CGGCGGTGGA CGTGAGCCGC
CTCGTGCTGT CGACTTTGCG CAGCATCCGC GCGCACGACG CCGTGCCGTT CGGCTCGCCG
TATCCGGATC CGTCGCTGTT CCCGTGGCGG CGCATCAACC AGTACGCGAA CGCGATCGCG
CGACGCCACG CAAGTTGGAA CCTGATCGAC GACCTGCCGC CGGGCAACCC CGAGCTGATC
CGGCAGATTG CCCGCCGCTA TGCCGAAAAC GGCGTACCGG TCGACCCCGA CGAAATCGTC
ATTACGCTCG GCGCGACAGA AGCGATCAAC CTGAGCTTGC AGGCGGTCGC CAAACCCGGC
GACACGGTGG CCGTCGAATC GCCGACTTAT TACGCGATGC TGCACGCCAT CGAGAGGCTC
GGCATGCGCG CAATCGAGGT GGCGACGCAT CCCGTTCACG GCATCGACAT CGAGGCCTTG
GCTCAAGTGA TCGCCGAACA GAAGATCGCG GCCTGCATGG TGATGCCGAA CTTTCAGAAT
CCGCTTGGTT TCCAGATGCC CGATGCACGC AAGCGGCAAC TGGTCGAACT GCTGGCGGCG
CACGAGATAC CGGTGATCGA GAACGACGTC TATCAGGAGC TTTACTTCGG CGAGACGCGG
CCATCGACCT TGAAGAGCTT CGACACGAAA GGGCTCGTGC TGCACTGCGC ATCGTTTTCG
AAGAGTTTGA CCGCGTCGTA CCGGATCGGC TGGGCGCTGC CGGGACGCTA TCGCGCGCAG
GTCGAGAAGC TGAAGTTTCT CAATACGCTG ACCACGCCGT CGGTGCCGCA AGTCGCGGTC
GCCGATTATT TGCGGCAGGA CGGCTACGAT CGGCATCTGC GGCACGTGCG CAAGGTTTAT
CGGCAGCAGG CCAGCATCAT GATGGCGATG GTGCAGCGGT TTTTCCCGGT CGGCACGCGC
ATGTCGACGC CGCTGGGCGG CTACGTGCTG TGGGTGGAAC TGCCCGAGCG GGTCGATTCG
ATGCGGCTCT ACCAGGCGGC GCTCGCGCGC AGCATCACGG TCGGGCCGGG CATGATGTTT
TCGACGCGTA ACGATTTTCG CCACTTCATC CGGCTCAACT ACAGCTATCC GTGGACCGCG
CAGACCGAAG CGGCTTTGAA GACGCTCGGC GAACTGGTCA TGCAGATGGC GTAA
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| Protein sequence | MKLYEKLADE MTEAVRRGVF AAGERIPSVR QASQQHGVSI KTVLHAYALL ESRGIVETRP
QSGYFVRDAV ARAVALDEPR PGRLLTPHTP PVAAAVDVSR LVLSTLRSIR AHDAVPFGSP
YPDPSLFPWR RINQYANAIA RRHASWNLID DLPPGNPELI RQIARRYAEN GVPVDPDEIV
ITLGATEAIN LSLQAVAKPG DTVAVESPTY YAMLHAIERL GMRAIEVATH PVHGIDIEAL
AQVIAEQKIA ACMVMPNFQN PLGFQMPDAR KRQLVELLAA HEIPVIENDV YQELYFGETR
PSTLKSFDTK GLVLHCASFS KSLTASYRIG WALPGRYRAQ VEKLKFLNTL TTPSVPQVAV
ADYLRQDGYD RHLRHVRKVY RQQASIMMAM VQRFFPVGTR MSTPLGGYVL WVELPERVDS
MRLYQAALAR SITVGPGMMF STRNDFRHFI RLNYSYPWTA QTEAALKTLG ELVMQMA
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