| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2613 |
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| Symbol | |
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| ID | 6282479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2952317 |
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| End bp | 2953834 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642622173 |
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| Product | nitrogen metabolism transcriptional regulator, NtrC, Fis Family |
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| Protein accession | YP_001896232 |
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| Protein GI | 187924590 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.262075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.337691 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCGA TCTGGATAGT AGACGACGAT CAATCGATTC GCTGGGTGCT CGAAAAAGCA
CTGGCCCGCG AAAACTTCGC GACCCGCAGC TTCGCGAACG TGCGCGAAGC GTCGGCCGCG
CTCGACCACG ACAGCCCGCA GGTGCTGGTG TCCGACATCA GGATGCCTGG CGGCTCCGGC
CTCGAATTGC TGCAAACCGT ACGCGACAAG GTGCCGGGCT TGCCCGTCAT CATCATGACG
GCGTTCTCGG ATCTGGATAG CGCGGTCGCC GCATTCCAGG GCGGTGCCTT CGAATACCTC
GCCAAACCGT TCGACGTCGA CAAGGCCGTC GAACTGATCC GCCGTGCCGT GGGCGAAAGC
ATGCGCGGCG AACAGACGTG GGACGAACGC GTCACCGAAG CACCAGAAAT GCTCGGCCAG
GCACCAGCGA TGCAGGATAT GTTCCGCGCG ATCGGCCGTT TGTCCCATTC TGCGGCAACC
GTGCTCATTA CCGGCGAATC AGGCACCGGG AAGGAACTGG TCGCGCGTGC GTTGCACCGA
CATAGCCCAC GCGCGAACGG TCCCTTCATC GCGCTGAACA CCGCCGCGAT TCCAAAAGAT
CTGTTGGAAT CCGAACTATT CGGTCACGAG CGCGGGGCCT TCACCGGCGC GCAGGCCATG
CGTCAGGGCC GTTTCGAACA GGCCGAGAAC GGCACGCTGT TTCTCGACGA AATCGGCGAT
ATGCCGTTCG ATCTGCAGAC GCGTCTGTTG CGAGTGTTGT CGGATGGGCA GTTCTATCGC
GTCGGCGGCC ACAATCCATT GCGCGCCAAT GTGCGTGTGA TCGCGGCGAC GCACCAGAAT
CTCGAATCGC GCGTGCGTCA GGGTCTGTTC CGCGAGGACT TGTATCACCG TCTCAATGTG
ATTCGCTTGC GCTTGCCGGC TTTGCGCGAG CGCAGCGAGG ACATTCCGCT GCTCACACGG
CACTTTCTGC AAAAGAGCGC GCGCGATCTC GGCGTCGAAC CGAAGCGTGT GTCCGAAGAG
GCGCTGGCTC ATCTCGCGTC GTTGCCGTTT CCAGGCAATG TGCGTCAATT GGAGAATCTC
GCCAACTGGC TGACGGTGAT GGCGCCGGCG CAGACCATCG AGATCAAGGA CTTGCCGCCC
GATCTCGGCC CCGCGCAAGC CGGCGTGAGC GATCTGACCG GCGGTGGCGG CGGGGTGATC
GGCGCGGGTG ATGCGACTCT CGCAGGCGGC GTGCCGGTCA ACGGCACGAG TGCGGCAACG
CATCCGGCCG CGGCGGGCGG CATGCCGGCC GCGACTACCG TCAGCGCCTG GGAAGGCGGG
TTACGCACCG AAGTCGCGCG GATGTTGCGC GAGAATGCCG CGGACGTCAT GGATGAACTC
GCGCGCCGTT TCGAAGCGGC GGTGATTCGC GAGGCGCTCG ACTTCACGCG CGGACGCAAG
GTCGAAGCGG CGGAGCGTCT CGGCATCGGC CGCAATACGA TTACGCGCAA GATTCAGGAA
CTCAATCTCG AGCCCTGA
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| Protein sequence | MKPIWIVDDD QSIRWVLEKA LARENFATRS FANVREASAA LDHDSPQVLV SDIRMPGGSG
LELLQTVRDK VPGLPVIIMT AFSDLDSAVA AFQGGAFEYL AKPFDVDKAV ELIRRAVGES
MRGEQTWDER VTEAPEMLGQ APAMQDMFRA IGRLSHSAAT VLITGESGTG KELVARALHR
HSPRANGPFI ALNTAAIPKD LLESELFGHE RGAFTGAQAM RQGRFEQAEN GTLFLDEIGD
MPFDLQTRLL RVLSDGQFYR VGGHNPLRAN VRVIAATHQN LESRVRQGLF REDLYHRLNV
IRLRLPALRE RSEDIPLLTR HFLQKSARDL GVEPKRVSEE ALAHLASLPF PGNVRQLENL
ANWLTVMAPA QTIEIKDLPP DLGPAQAGVS DLTGGGGGVI GAGDATLAGG VPVNGTSAAT
HPAAAGGMPA ATTVSAWEGG LRTEVARMLR ENAADVMDEL ARRFEAAVIR EALDFTRGRK
VEAAERLGIG RNTITRKIQE LNLEP
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