| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2612 |
|---|
| Symbol | |
|---|
| ID | 6281648 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 2950103 |
|---|
| End bp | 2952202 |
|---|
| Gene Length | 2100 bp |
|---|
| Protein Length | 699 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642622172 |
|---|
| Product | Prolyl oligopeptidase |
|---|
| Protein accession | YP_001896231 |
|---|
| Protein GI | 187924589 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1505] Serine proteases of the peptidase family S9A |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.270584 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCAC CTCGCACTCT CACCGCTCCT TTCTCCTGGC CGCTTTCCCC CGATCCCTTT
CTGTCGCTCG AAGCGCTCGA CGACCCTGAC GCGCTCGCGT GGGTCGAACA GCAGAACGCG
CGCACGCGCG CCGCGTGGTG CAGCAGCGCG GAGTTCGCCT CGCTCAGGCA GCGGCTCGCC
GACGCCTATC TGCCCCGCGA GCGTCCGGTG ATTCCCGACC GCTGGAAGGA TTGGGCTTAC
GACCTGTGGC AGGACGAGCG CAATCCCAAG GGCATCTGGC GGCGTACGAC ATGGGCGGCA
TGGCGTGGCG GCAAACCGGA GTGGCAGAAC CTGCTCGACT TCGACGCGCT CGGCGCCGCC
GAAGGCACGC CGTGGGTGTG CGTGGAACTG GACATTCTCT ATCCCGATGG CGACCGCGCG
CTGATCACGC TGTCGCCGGG CGGCTCGGAC GCGCTCGTGG TGCGCGAATT CGACATCGAC
GCGCGACGCT TCGTCGACGA CGGTTTCGTG ATCGCGAAGG CCGGCAAGCA CACGGCGTCG
TGGATCGATC GGGACACGCT TTATGTGGGC TGGGATAACG GCCGCAAGAG CTTGACGCGC
TCCGGGTATC CGCGCGAAGT GCGGCGCTGG ACACGCGGCA CGGCGCTCGC CGACGCGCCT
GTGGTGTTCA AGGGCGCGTT CGGCGATATC GGCGTGGAAG CACACTACGA TCCGGTCGAG
CAGCGGCATA CGGTGGTGAG CAGCGTCGAT TTCTTCGATT CACACACGTA CTACCTCGAT
GACGCCCACG GTGCCACCGA CGCATGGCGC CGCTACGAGG TGCCGTCGCA TGTCGCGGTG
AGCGGCTGGC AAGGCTGGTT GTTGCTCGAG CCGCGACTCG ATTGGGACTG CAATGGCGCG
CACTATCCGG GCGGCGCGTT GCTGGTGATT CGCGAAGATG CGTTCCTGCG CGGCGAGCGC
GACGTCCTGC CGTTATTCAC GCCGACGCCG CAAACCTCGG CCTGCGAGTG GACGCATACG
CTCAACCATC TGATCGTGTC GTATCTGGAG GATGTGCAGA ACAAGACCTT GCTATTGACG
CCGTCGCAAG CCGACAACCA GGCGTGGCAT TGGCAGCAAC GCATCTTTCC GACGCGCGAC
GACACGCAAG CCGACGTGTC GCCCGTCGAG CCGACGCTCG ACGACGAAGT GTTCGTCGAT
ACCGACGACT ATCTGCAGCC GCCCGCATAC TGGCTCGCTG ATCTCGCGCG CGACGACCTG
AGCGAATGGG AATTGCTCGA CCGCTGGCCG ACGCAATTCG ACGCGACGCA ATTTACCGTC
ACGCGCGCTC ACGCAGTTTC CGCGGACGGC ACGCGCGTGC CGTACACCGT CGTCGGCCCA
CGCGATGCGC AACAACACGC ACGCCCATGC CTGCTCAACG GTTACGGCGG CTTTGCGATT
CCGTTGCTGC CGAGCTACCT CACCGGGCAA GGTATCGGCT GGCTGGCGCG CGGCGGTGTG
TACGTGGTCG CGCATATTCG CGGTGGCGGC GAGTTCGGCA CGAGATGGCA TACGGCCGCG
CAGGGCAAGC ATCGCCAGCG CGCGTTCGAT GATTTCATCG CGGTGGCCGA GGCGTTGATC
GACACGGGTG TGACGAGCGC CGCGCAACTC GGCATTCAGG GTGGCAGCAA CGGCGGCCTG
CTGGTGGCGG CGTGCATGGT GCAGCGCCCC GAGCTGTTCG GTGCCGTGGT ATGTGAGGTG
CCCTTGCTCG ACATGCGCCG CTATCATCTG CTGCACGCGG GCGCGTCATG GATAGACGAA
TACGGCGATC CCGACGAGCC CGATGAGGCA GGCATGCTGG CCGCTTACTC GCCGTATCAC
CGCGTGGCGG CGAACGTTGC GTATCCGCCG GTGCTGTTCA CCACGTCGAC GGCCGACGAC
CGTGTGCATC CCGGCCACGC GCGCAAGATG GCCGCGCGCA TGCAGGCGCT GGGCGTGGAG
CACGTGTGGT ATCGGGAGAA TACGGAGGGC GGGCACGGCG GCTCCGATGA ACTGGAGCAG
GCCGAGCACG ATGCGATGGT GTTCGAGTTC CTGTGGCGTA CGTTGAACCC GTCCACGTAG
|
|---|
| Protein sequence | MPAPRTLTAP FSWPLSPDPF LSLEALDDPD ALAWVEQQNA RTRAAWCSSA EFASLRQRLA
DAYLPRERPV IPDRWKDWAY DLWQDERNPK GIWRRTTWAA WRGGKPEWQN LLDFDALGAA
EGTPWVCVEL DILYPDGDRA LITLSPGGSD ALVVREFDID ARRFVDDGFV IAKAGKHTAS
WIDRDTLYVG WDNGRKSLTR SGYPREVRRW TRGTALADAP VVFKGAFGDI GVEAHYDPVE
QRHTVVSSVD FFDSHTYYLD DAHGATDAWR RYEVPSHVAV SGWQGWLLLE PRLDWDCNGA
HYPGGALLVI REDAFLRGER DVLPLFTPTP QTSACEWTHT LNHLIVSYLE DVQNKTLLLT
PSQADNQAWH WQQRIFPTRD DTQADVSPVE PTLDDEVFVD TDDYLQPPAY WLADLARDDL
SEWELLDRWP TQFDATQFTV TRAHAVSADG TRVPYTVVGP RDAQQHARPC LLNGYGGFAI
PLLPSYLTGQ GIGWLARGGV YVVAHIRGGG EFGTRWHTAA QGKHRQRAFD DFIAVAEALI
DTGVTSAAQL GIQGGSNGGL LVAACMVQRP ELFGAVVCEV PLLDMRRYHL LHAGASWIDE
YGDPDEPDEA GMLAAYSPYH RVAANVAYPP VLFTTSTADD RVHPGHARKM AARMQALGVE
HVWYRENTEG GHGGSDELEQ AEHDAMVFEF LWRTLNPST
|
|---|
| |