| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2579 |
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| Symbol | |
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| ID | 6281557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2912737 |
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| End bp | 2913960 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642622138 |
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| Product | cysteine desulfurase |
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| Protein accession | YP_001896198 |
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| Protein GI | 187924556 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.120053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.000683499 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACAACG ACACTCTCCA TCTGCCCATC TACATGGATT ACAGCGCGAC GACACCGATC
GATCCGCGCG TGGTGGACAA GATGATTCCG TATCTGCGTG AGCAGTTCGG CAACCCCGCA
TCGCGTAGCC ACTCGTATGG CTGGGCGGCG GAGCGCGCAG TCGAAGAAGC GCGTGAGAAT
GTCGCCGCGC TGGTGAACGC CGATCCGCGC GAAATCATCT GGACCTCGGG TGCCACGGAG
TCGGACAACC TGGCGATCAA GGGTGCCGCG CACTTCTACA AGAGCAAAGG CAAGCACATC
ATCACGGTGA AGACCGAGCA CAAGGCCGTG CTCGACACCT GCCGCGAACT CGAACGCGAA
GGCTTCGAAG TCACGTATCT GGACGTTAAA GACGACGGCC TGATCGACCT CGAAAAGTTC
AAGGTCGCGC TGCGTCCGGA CACGATTCTG GTGTCGGTCA TGTCGGTGAA CAACGAGATC
GGCGTGATCC AGGACATCGA GGCGATCGGC GAGATTACGC GTGAAAAGGG CATCATTTTT
CACGTCGACG CGGCGCAAGC CACCGGCAAG ATCGCGATCG ATCTGCAAAA GCTGAAGGTC
GACCTGATGT CGTTCTCGGC GCATAAGACG TATGGTCCGA AGGGCATCGG CGCGCTGTAC
GTGCGCCGCA AGCCGCGTAT CCGTATCGAA GCGCAGATGC ACGGCGGCGG TCACGAGCGC
GGCATGCGTT CGGGCACGCT GGCCACGCAC CAGATCGTCG GCATGGGCGA AGCGTTCCGT
ATCGCGCGCG AAGAAATGGC GACGGAAAAC GAGCGCGTTC GCATGCTGCG CGACCGTCTG
CTGCGCGGCC TGTCGGAAAT GGAAGAAGTG TATGTGAACG GCGACATGGA AAAGCGTGTG
CCGCACAATC TGAACATCAG CTTCAATTTC GTCGAAGGCG AATCGCTGAT CATGGCGGTG
AAGGATGTGG CGGTGTCGTC GGGCTCGGCT TGCACGTCGG CTTCGCTGGA ACCGTCGTAT
GTGTTGCGCG CGCTGGGCCG CAACGACGAG CTGGCGCACA GCTCGATCCG CTTCACGGTG
GGCCGTTTCA CGACCGAGCA GGATGTCGAT TACGTGATCA ACCTGCTGAA GACCAAGATT
TCGAAGCTGC GCGATTTGTC GCCGCTGTGG GAAATGCACA AGGACGGGAT CGATATTTCG
ACCATCCAGT GGGCAGCGCA CTGA
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| Protein sequence | MNNDTLHLPI YMDYSATTPI DPRVVDKMIP YLREQFGNPA SRSHSYGWAA ERAVEEAREN
VAALVNADPR EIIWTSGATE SDNLAIKGAA HFYKSKGKHI ITVKTEHKAV LDTCRELERE
GFEVTYLDVK DDGLIDLEKF KVALRPDTIL VSVMSVNNEI GVIQDIEAIG EITREKGIIF
HVDAAQATGK IAIDLQKLKV DLMSFSAHKT YGPKGIGALY VRRKPRIRIE AQMHGGGHER
GMRSGTLATH QIVGMGEAFR IAREEMATEN ERVRMLRDRL LRGLSEMEEV YVNGDMEKRV
PHNLNISFNF VEGESLIMAV KDVAVSSGSA CTSASLEPSY VLRALGRNDE LAHSSIRFTV
GRFTTEQDVD YVINLLKTKI SKLRDLSPLW EMHKDGIDIS TIQWAAH
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