Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2567 |
Symbol | |
ID | 6284394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 2899643 |
End bp | 2900896 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642622126 |
Product | lipoprotein releasing system, transmembrane protein, LolC/E family |
Protein accession | YP_001896186 |
Protein GI | 187924544 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.178921 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0571791 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAAATTTC CCTACGAATG GCAGATTGGC TGGCGCTACA CCCGCGCCGG CAAACGCACG ACCGGTAACG GCTTCATTTC CTTCATCGCG CTCGTGTCGA TGTCGGGCAT CGCGCTCGGC GTCGCGGCGC TGATCGTCGT GTTGTCCGTG ATGAACGGCT TTCAGAAAGA GGTGCGCGAC CGCATGCTGT CGGTGCTCGC GCACGTGGAA ATCTTTTCGC CGACCGGCTC GATGCCCGAC TGGCAACTCA CCGCCAAAGA GGCCCGCCAG AACAAGGAAG TGATCGGCGC GGCGCCGTAT GTCGAAGCCC AGGCGCTGCT CACGCGCCAG GACGCGGTGA GCGGCGTGGC GCTGCGCGGC GTCGAGCCGT CGCTGGAGCC GCAGGTGTCC GATATCGGTA AGGAGATGAA AGGCGGCAGT CTGAACGCGC TGGTGCCGGG CGACTTCGGC ATCGTGCTGG GCGCCGACCT CGCCACCAAT CTCGGCGTGA CGGTCAACGA CAAGATCACG CTGGTCGCGC CCGAAGGCAC CATTACGCCC GCCGGCATGC TACCGCGGCT AAAACAGTTC ACGGTGGTGG GCATCTTCGA GTCGGGTCAC TACGAATACG ACAGCACGCT CGCGCTGATC AACATCAAGG ACGCGCAGGC GCTGTTCCGG CTGCCCGCGC CGACCGGCGT GCGGCTGCGC CTGACCGACA TGCAGCGCGC GCCGGAAGTC GCGCATCAGC TTGCGCGCAC GCTGTCCGGC GATTTATACA TTCGCGACTG GACGCAGCAG AACAAGACCT GGTTCTCGGC GGTGCAGATC GAAAAACGCA TGATGTTCAT CATCCTCACG CTGATCATCG CGGTGGCGGC GTTCAATCTG GTGTCGTCGC TTGTGATGAC GGTGACCAAC AAGCAGGCCG ACATCGCGAT TCTGCGCACG CTCGGCGCGC AGCCCGGTTC GATCATGAAG ATTTTCGTGG TGCAGGGCGT GACGATCGGT TTTATCGGCA CTGCCACCGG CGTCGCGCTC GGCTGCCTGA TCGCGTGGAG TATTCCATGG CTCGTGCCGA TGATCGAACA CCTGCTCGGC GTGCAGTTCC TGCCGCCGTC GGTGTATTTC ATCAGCGAAC TGCCGTCCGA ACTGGTTCCG GCCGACGTCG CGCGAATCGG CGTCATCGCC TTCGTGATGT CCGCGCTGGC CACGTTGTAC CCGAGCTGGC GTGGTGCCAA AGTCCGTCCG GCGGAGGCAC TGCGCTATGA ATGA
|
Protein sequence | MKFPYEWQIG WRYTRAGKRT TGNGFISFIA LVSMSGIALG VAALIVVLSV MNGFQKEVRD RMLSVLAHVE IFSPTGSMPD WQLTAKEARQ NKEVIGAAPY VEAQALLTRQ DAVSGVALRG VEPSLEPQVS DIGKEMKGGS LNALVPGDFG IVLGADLATN LGVTVNDKIT LVAPEGTITP AGMLPRLKQF TVVGIFESGH YEYDSTLALI NIKDAQALFR LPAPTGVRLR LTDMQRAPEV AHQLARTLSG DLYIRDWTQQ NKTWFSAVQI EKRMMFIILT LIIAVAAFNL VSSLVMTVTN KQADIAILRT LGAQPGSIMK IFVVQGVTIG FIGTATGVAL GCLIAWSIPW LVPMIEHLLG VQFLPPSVYF ISELPSELVP ADVARIGVIA FVMSALATLY PSWRGAKVRP AEALRYE
|
| |