| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2548 |
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| Symbol | |
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| ID | 6281238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2879263 |
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| End bp | 2880189 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642622107 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_001896167 |
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| Protein GI | 187924525 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00128586 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0288047 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTAACG GCAACCAAAG CAGCAAGCTC GGCAGCAACG ACAGCGTTCA GATTCGCGGC
AGCATTCCCG CCATCATCAC CCCGATGCTC GAAGACGGCA GCCTCGATCT GCCGGCGTTT
CGCAAACTGA TCGACTGGCA CATCGCGGAG GGCACGAACG CTCTCGTCGT GGTTGGCACG
AGCGGCGAGT CGGCCACGCT GTCGGTCGAA GAACACGTGC TGATGGTCAA GACCGCAGTC
GAGCACACGG CGGGCCGGAT TCCGGTGATC GCGGGCTCGG GCGGCAACTC CACGACGGAA
GCCATCGAAC TCACCCAGCA GGCCAAGGAA GTCGGCGCGG ACGCCACGCT CCAGGTCGTG
CCCTACTACA ACAAGCCGAC GCAGGAAGGC ATCTACCGCC ACTTCGCGAA GATCGCCGAA
ACCGTCGATC TGCCGGTGAT TCTGTACAAC GTGCCGGGCC GCACCGTTGC CGACATGAGC
AACGACACCA TTCTGCGTTG CGCGCAGGTG CCGGGCATCA TCGGTGTGAA GGAAGCGACC
GGCAATATCG ATCGCGCCGC GCATCTGATC AAGTCCGCGC CCAAGCATTT CGGCATCTAC
AGCGGCGACG ATCCCACCGC GATCGCGCTG ATGCTGCTCG GCGGCCACGG CAATATTTCG
GTCACCGCCA ACGTCGCGCC GCGCGCGATG AGCGATCTTT GCAAGGCCGC CCTGGCCGCA
GACGCGAAGA CCGCGCGTGA AATTCATCTG AAACTCCTGT CGCTGCATAA GAACCTGTTC
ATCGAATCGA ATCCGATTCC GGCCAAATGG GCACTGCAGC AACTGGGTCG TGTGCAGGGC
GGAATCCGCC TGCCGCTCAC GCCGCTCGAC GCGCAATACC ACGAAGTGGT GCGCGGCGCG
CTGCGCGAAG CGGGCCTGCT GGGGTAG
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| Protein sequence | MTNGNQSSKL GSNDSVQIRG SIPAIITPML EDGSLDLPAF RKLIDWHIAE GTNALVVVGT
SGESATLSVE EHVLMVKTAV EHTAGRIPVI AGSGGNSTTE AIELTQQAKE VGADATLQVV
PYYNKPTQEG IYRHFAKIAE TVDLPVILYN VPGRTVADMS NDTILRCAQV PGIIGVKEAT
GNIDRAAHLI KSAPKHFGIY SGDDPTAIAL MLLGGHGNIS VTANVAPRAM SDLCKAALAA
DAKTAREIHL KLLSLHKNLF IESNPIPAKW ALQQLGRVQG GIRLPLTPLD AQYHEVVRGA
LREAGLLG
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