Gene Bphyt_2524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2524 
Symbol 
ID6282861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2850040 
End bp2852307 
Gene Length2268 bp 
Protein Length755 aa 
Translation table11 
GC content65% 
IMG OID642622083 
Producthelicase c2 
Protein accessionYP_001896143 
Protein GI187924501 
COG category[L] Replication, recombination and repair
[K] Transcription 
COG ID[COG1199] Rad3-related DNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00188741 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.63353e-10 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
TTGAATTCAC CGCTTGAAAC TTCATCCCGT GCCACGCCGG GCGACGCATC TGGAGCCGTC 
GCACCGGCGC CGCGTCCTGC CGCGTCCGCA CTGAGCGCGT CGCTGAATCC ACGCCGCGTC
GCCGAACTGG ACGAGATTTT CGCCGCCAAT GGTTTGCTGG CCCGTCAGAT CGACGGCTAC
CGCTCGCGCG CGTCGCAGAT CGAAATGTCG CGCGCCGTGG CTGCCGCCAT GGAGGCGTCG
GGTCGCGCAA TGCCCGAGCC CGCCATGTTC GAGGCGCAGA AGCGTCCGGC GCGGCGTCTG
CAGGGCGCAG CCGATACCGC CGCCGAGGCC GCTGAGGGCG TCGAAGCGGG CGGCCTCGAC
GGCAGCGAAA ACACGCTGAT CGTCGAAGCT GGTACCGGCA CCGGCAAGAC CTACGCGTAC
CTGGTGCCGG CCATGCTGTG GGGCGGCAAA GTGATCGTCT CGACCGGCAC GAAACATTTG
CAGGATCAGC TCTTTCAGCG CGACATTCCG ACCGTGCGCG ATGCGCTCGC GGTGCCGGTC
TCGGTCGCTA TGCTCAAGGG CCGTGCGAAT TACCTGTGCC ACTACTATCT GCAGCGCACT
GCGGATAACG GCCGTCTGCC GTCGCGCCAG GAAACCTCGT ACCTGCAGGA TATCGTGCGC
TTCGCCAAGA TCACGCGCAC CGGCGACAAG GCCGAACTGG CGAGCGTGCC GGAAACGGCC
GCGGTGTGGT CGATGGTCAC GTCCACGCGC GAAAACTGTC TCGGCCAGGA ATGTCCGCAT
TACAAGGACT GCTTTGTAAT GCAGGCGCGC CGCGAGGCGC AGCAGGCGGA TATCGTGGTG
GTGAATCACC ATCTGTTTTT CGCCGACATC ATGTTGCGCG ATACGGGCAT GGCCGAGTTG
CTGCCCACCG CCAACACCGT GATTTTCGAC GAAGCGCATC AATTGCCCGA GACAGCTACG
CTGTTTTTCG GCGAAACGCT CTCGACTACG CAGTTTCTCG AGCTCGCGCG CGATTCGGTC
GCCGAAGGTT TGGGCCATGC GCGTGAAACG GTCGATTGGG TCAAGCTCGG CGCCACGCTC
GAGCGCGCGG CGCGCGATGT GCGGCTCGCC TTCAAGGAAG ATTCGGTGCG TTTGTCGATC
GGCCAGTTGG CTGACGATCA TCCGCTGTTC CCCGCGCTCG AAACCCTCGA AACCGAACTC
GATGCATTGG CGTCCGCGTT GGCCGGTCAA GCTGAGCGCG CCGAATCGAT CGGTGCGTGT
CTGCGCCGCG CACGCGAGCT GCAAGGCGTG CTGGCCGGCT GGACCACGCC ACCCACGCCG
ACCGAGCGCG AAGCCGCTGA CGTCGCCTCT ACTGACGGCA AAACAGAGCG CGCCGATCCG
AACGAAAAGG TGCGCTGGAT CGAAGTCTTC TCGCATACGG TGCAGCTGCA CGAAACGCCG
TTGTCGGTCG CGCCGATCTT CGCGAAACAG CGCGCCGGTG TGCCGCGCGC GTGGATCTTT
ACGTCGGCCA CGCTGTCGGT GCGCGGCGAT TTCACGCACT ATGCCGCGCA GATGGGCCTG
AACGCGAAGC GCTCGATGAC GCTGCCCAGT CCCTTCGACT ATCCGACGCA GGGGCTGCTC
TACGTGCCGC GCAATTTGCC GCAGCCATCT TCGCCGATGT TCACCGACGC CGTATTCGAC
GCCGCATTGC CTGCGATCGA AGCATCGGGC GGCGGCGTCT TCATGCTGTG CACGACGCTG
CGCGCGGTGG ACCGCATCTC GGCCAAGCTG CGCGACACGA TCGAAGCGCG CGGCTGGGAC
TATCCACTGC TCGTGCAGGG CGATGCGAGC CGCACCGAAT TGCTGGATCG CTTCCGCTCA
TATGGCAACG CAATCCTGGT GGGCAGCCAG AGCTTCTGGG AAGGCGTGGA CGTGCGCGGC
GACGCTTTGT CGCTGGTGGT GATCGACAAG CTGCCGTTCG CGCCGCCCGA CGATCCGGTT
TTGTCAGCTC GACTCGAAGC GCTCACCAAG AAGGGCTTGA GCCCATTCGC CGTGCATCAG
TTGCCGCAGG CCGTCATCAC CCTGAAGCAG GGCGCAGGCC GTCTGATCCG CGCTGAGACC
GATCGTGGCG TGCTGATGAT CTGCGACACA CGACTCGTCG ACAAACCGTA TGGGCGCCGT
ATCTGGCAGA GCCTGCCGCC TTTCAAACGC ACGCGTGAGA TCGAGGTGGT GCGGGAGTTT
TTTGAAGAGA GCGCCACGCC GGCGCAAGAG GCTGATCGGG CTGATTAA
 
Protein sequence
MNSPLETSSR ATPGDASGAV APAPRPAASA LSASLNPRRV AELDEIFAAN GLLARQIDGY 
RSRASQIEMS RAVAAAMEAS GRAMPEPAMF EAQKRPARRL QGAADTAAEA AEGVEAGGLD
GSENTLIVEA GTGTGKTYAY LVPAMLWGGK VIVSTGTKHL QDQLFQRDIP TVRDALAVPV
SVAMLKGRAN YLCHYYLQRT ADNGRLPSRQ ETSYLQDIVR FAKITRTGDK AELASVPETA
AVWSMVTSTR ENCLGQECPH YKDCFVMQAR REAQQADIVV VNHHLFFADI MLRDTGMAEL
LPTANTVIFD EAHQLPETAT LFFGETLSTT QFLELARDSV AEGLGHARET VDWVKLGATL
ERAARDVRLA FKEDSVRLSI GQLADDHPLF PALETLETEL DALASALAGQ AERAESIGAC
LRRARELQGV LAGWTTPPTP TEREAADVAS TDGKTERADP NEKVRWIEVF SHTVQLHETP
LSVAPIFAKQ RAGVPRAWIF TSATLSVRGD FTHYAAQMGL NAKRSMTLPS PFDYPTQGLL
YVPRNLPQPS SPMFTDAVFD AALPAIEASG GGVFMLCTTL RAVDRISAKL RDTIEARGWD
YPLLVQGDAS RTELLDRFRS YGNAILVGSQ SFWEGVDVRG DALSLVVIDK LPFAPPDDPV
LSARLEALTK KGLSPFAVHQ LPQAVITLKQ GAGRLIRAET DRGVLMICDT RLVDKPYGRR
IWQSLPPFKR TREIEVVREF FEESATPAQE ADRAD