| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2506 |
|---|
| Symbol | |
|---|
| ID | 6283865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 2828826 |
|---|
| End bp | 2830076 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642622065 |
|---|
| Product | aspartate kinase |
|---|
| Protein accession | YP_001896125 |
|---|
| Protein GI | 187924483 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0527] Aspartokinases |
|---|
| TIGRFAM ID | [TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0261079 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.00613103 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTCA TCGTACACAA ATACGGCGGC ACCTCGATGG GCTCGGTCGA GCGCATCAAG
AACGTCGCCA AGCGCGTCGC GAAATGGCAC AAGGCTGGCC ACAAGATGGT CGTCGTGCCG
TCGGCGATGT CCGGCGAAAC CAACCGCTTG CTCGGCCTCG CGAAAGAAAT TACGGGTCAG
CCGAGCCCGC GCGAACTCGA CATGATCGCC GCCACGGGCG AGCAGGTCAG CTCGGGCCTG
CTCGCCATCG CGCTGCAGGA AGCCGGCGTC GACGCGGTCA GCTACGCCGG CTGGCAAGTG
CCGGTCAAAA CGGATAGCGC GTTCACCAAA GCGCGCATTA GCGAGATCGA CGGCGAGCGC
GTGCTGCGCG ATCTCGACGC GGGCAAGGTG GTGGTGATCA CAGGCTTCCA GGGTATCGAT
CCCGACGGCC ATATCACTAC GCTCGGCCGC GGCGGTTCGG ATACGTCGGC GGTCGCGGTC
GCGGCCGCGT TGAAAGCCGA TGAGTGCCTG ATTTACACTG ACGTCGACGG GGTCTACACG
ACCGACCCGC GCGTGGTGGA AGAAGCGCGC CGGCTCGATC GCGTGACGTT CGAAGAAATG
CTGGAAATGG CAAGCCTGGG TTCGAAGGTG CTGCAGATCC GCTCGGTGGA ATTCGCCGGC
AAATATCAGG TGAAGACACG TGTGTTGTCG AGCCTGACCG ATCCGCTGAT GCCGCTCGAC
GCTGAAATGA AGTCGGGCAC CCTGATTACT TTTGAAGAAG ACGAGACCAT GGAAAAAGCA
GTCATCTCGG GCATCGCGTT TCAGCGCGAC GAAGCTCGCA TCGCCGTGAT GGGTGTGCCC
GACAAGCCGG GCATCGCGTA TCAGATTCTC GGCCCGGTGG CGGACGCGAA TATCGACGTC
GACATGATCA TCCAGAACCA GAGCGTGGAA GGCAAAACGG CGTTCACGTT CACGGTCGGC
CGCGGCGACT ATCAGCGCGC CATGGACATC CTCACGACCC AGGTGAAGGG CCATGTGCAG
GCCGAGCAGG TGCTGGGCGA TCCGAAGGTG TCGAAGGTCT CGGTGGTGGG CGTCGGCATG
CGCTCGCATG TGGGTATCGC GAGCACGATG TTCCGCACGC TGTCGGAAGA GGGCATCAAC
ATTCAGATGA TCTCGACCTC GGAAATCAAG ATCTCGGTGC TGATCGACGA GAAGTATATG
GAGCTCGCCG TGCGCGCGCT GCATAAGGCA TTCGAACTGG ATCAGGCGTA A
|
|---|
| Protein sequence | MALIVHKYGG TSMGSVERIK NVAKRVAKWH KAGHKMVVVP SAMSGETNRL LGLAKEITGQ
PSPRELDMIA ATGEQVSSGL LAIALQEAGV DAVSYAGWQV PVKTDSAFTK ARISEIDGER
VLRDLDAGKV VVITGFQGID PDGHITTLGR GGSDTSAVAV AAALKADECL IYTDVDGVYT
TDPRVVEEAR RLDRVTFEEM LEMASLGSKV LQIRSVEFAG KYQVKTRVLS SLTDPLMPLD
AEMKSGTLIT FEEDETMEKA VISGIAFQRD EARIAVMGVP DKPGIAYQIL GPVADANIDV
DMIIQNQSVE GKTAFTFTVG RGDYQRAMDI LTTQVKGHVQ AEQVLGDPKV SKVSVVGVGM
RSHVGIASTM FRTLSEEGIN IQMISTSEIK ISVLIDEKYM ELAVRALHKA FELDQA
|
|---|
| |