Gene Bphyt_2496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2496 
Symbol 
ID6283563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2817633 
End bp2818586 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content66% 
IMG OID642622055 
ProductPatatin 
Protein accessionYP_001896116 
Protein GI187924474 
COG category[R] General function prediction only 
COG ID[COG1752] Predicted esterase of the alpha-beta hydrolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.66649e-06 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0142834 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGCCCT CATCGCCTAG CCTCGCCCGC CGCAACTTTT CACTGGCCGC CGCCTCCGCG 
GTGCTGGCCG CCTGCACCAC GACCGGCGGC AAAACCGACT CTACGCCCGT CGCCGCCACG
CCCGTTACGC CCACAGCCAC ACCGTCGCTC GACAAGCCGC AGCGGCCGTT GCGCGTCGCG
CTCGCGCTGG GCGGCGGCGC GGCGCGAGGC TTCGCGCACA TCGGCGTAAT CAAGGGGCTC
GAGGCGCGCA ATATCCAGAT CGATCTCGTG GCCGGCACCA GCGCCGGCTC GGTGGTGGGC
GCGCTGTACG CGTCGGGCAT GAACGGCTTT GCGCTGAACA AGCTCGCCCT GACCATGGAC
GAAGCGTCGA TCAGCGACTG GGCCATGCCG TTTCGCACGC GCGGTTTTCT GCAAGGCGTC
GCGTTGCAGA ACTATCTCAA CACGACGCTC AACAACCGCC CGATCGAGAA GATGGCCAAG
CCGCTGGGCG TGGTCGCCAC CGACCTGAGG TCGGGCCAGC CGATCCTGTT CCAGCGCGGC
AATACGGGTA TCGCGGTGCG TGCGTCGTGC AGCGTGCCGT CGATTTTCGA GCCGGTGAAG
ATCGGCGGCC GCGAGTATGT GGACGGCGGG CTGGTGAGCC CGGTGCCGGC GTCGTTCGCG
CGCAAGATGG GCGCGGACTT CGTGATCGCC GTGGATATCT CGCAGCGCCC AGAAAGCGGT
CTGACGGCCA GTTCGTTCGA CGTGCTGATG CAGACCTTCA CGATCATGGG CCAGACGATC
AAGGCCTATG AACTCGACAA ATACGCCGAC ATCGTGATCC GCCCGAATCT GGCCGCCATG
AGCGGCAGCG ATTTCTCGCA ACGCAACGCG GCGATTCTGG CCGGCGAGGA AGTGGTGGCG
AAGATGATGC CGGAATTGCA ACGCAAGCTA GCGGCAAGCC GGGCCGCGGC CTGA
 
Protein sequence
MKPSSPSLAR RNFSLAAASA VLAACTTTGG KTDSTPVAAT PVTPTATPSL DKPQRPLRVA 
LALGGGAARG FAHIGVIKGL EARNIQIDLV AGTSAGSVVG ALYASGMNGF ALNKLALTMD
EASISDWAMP FRTRGFLQGV ALQNYLNTTL NNRPIEKMAK PLGVVATDLR SGQPILFQRG
NTGIAVRASC SVPSIFEPVK IGGREYVDGG LVSPVPASFA RKMGADFVIA VDISQRPESG
LTASSFDVLM QTFTIMGQTI KAYELDKYAD IVIRPNLAAM SGSDFSQRNA AILAGEEVVA
KMMPELQRKL AASRAAA