| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2479 |
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| Symbol | |
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| ID | 6283995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2798094 |
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| End bp | 2798900 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642622033 |
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| Product | phosphomethylpyrimidine kinase |
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| Protein accession | YP_001896099 |
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| Protein GI | 187924457 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0351011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.000627669 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTCAAC CGATTCCCAA TGTGCTGACG ATCGCCGGTT CCGATTCCGG CGGCGGCGCC
GGCATTCAGG CCGACCTCAA GGCTTTCTCG GCGCTCGGCG CGTACGGCGC GAGCGTGATT
ACCGCGCTCA CGGCGCAGAA CACGCGCGGC GTCACCGCGA TTCACGCGCC GGACCCCGGC
TTCATTACCG CACAACTCGA CACGGTGTTC GACGACATCC GCATCGACGC CGTGAAGATC
GGCATGCTGG CGAACGCGCC GATCGCGCGC GCGGTCGCTG ACGCGCTGCG CCGGCACAAG
CCGAAGCACA TCGTGCTCGA CACGGTGATG ATTTCGAAGA GCAACCACGC GTTGCTGCTG
CCGGACGCGG TCGCTGCGGT GCGCGACGAA TTGCTGCCGC TCGCCGATCT GCTGACGCCC
AATCTGCCGG AAGCGGCCGC GTTGCTCGGC GTGCAAGCCA CGACCGATGA AGCCGGCATG
GTCGAGCAAG GCGAAGCGCT GCGCGCGCTC GGCGCACGCG CGGTGCTGAT GAAGGGGGGC
CATTTGAGCG CGACGGATAG TCCGGACTGG CTCGTGCAGG ACAGCGGCAC GCTTCGTTTA
GGCGGGCCGC GGGTGCCGGT GAAGAATACG CATGGGACAG GCTGCACGCT GTCGTCGGCG
ATTGCGGCGC TGATTCCGCA GCGTGGGGAT CTGGCGAGCG CGGTCGCCGA TGCGAAGCTG
TATTTGACCG GCGCGCTGCA GGCGAGCGAT CGGCTGGACG TCGGCGGCGG CGTGGGGCCG
GTGCATCATT TTTATCGGTG GTGGTGA
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| Protein sequence | MTQPIPNVLT IAGSDSGGGA GIQADLKAFS ALGAYGASVI TALTAQNTRG VTAIHAPDPG
FITAQLDTVF DDIRIDAVKI GMLANAPIAR AVADALRRHK PKHIVLDTVM ISKSNHALLL
PDAVAAVRDE LLPLADLLTP NLPEAAALLG VQATTDEAGM VEQGEALRAL GARAVLMKGG
HLSATDSPDW LVQDSGTLRL GGPRVPVKNT HGTGCTLSSA IAALIPQRGD LASAVADAKL
YLTGALQASD RLDVGGGVGP VHHFYRWW
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