| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2474 |
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| Symbol | |
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| ID | 6284536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2792010 |
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| End bp | 2793323 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642622028 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001896094 |
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| Protein GI | 187924452 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0000208733 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCAGGGG CGTCGGCTGG GTCATTGGCG ACGGGTTCGG CCGGGTCGTC TGCTAACCCG
TCGGCGACGG CTTCGGCCGC GTCTCCGGCG GCTGCTTCGG CCGGGGGTTC GGCTGCCGCA
TCTTCGGGTA CCCCTTCGGC CGCATCCTCG GGCACTTCAC GGGCCGCATC TTCGGCTACT
TCACGGTCCA AGTCTTCGGC CACTTCACCC GCATCGGGCT CGGCCGCTTC GCCGACCGCC
TCCGCGCCGC CCGCGCTACA GGGTCTGCGC GTGCTCGACC TCACGCGCCT GCTGCCGGGC
CCGGTCGCCG CCTTGCGGCT TGCCGAACTG GGCGCCGACG TGCTGAAGAT CGAAGCCCCC
GGCGCGGGCG ACCCCACCCG CACGATGATG CAATCGTCGA GCGATCGCGT GGCCGGGCGG
CCCGGCGCGT TTTACCGGCT GGTGAATCGC GGCAAGCGCG AGACGCGCCT CGACCTCAAG
TCCGAAGCGG GACGCAACGT GCTGTGCGCG CTTGCCGCCG AAGCGGACGT GCTGATCGAG
AGTTTCCGGC CCGGCGTGAT GGAGCGGCTG GGCCTCGGCT ACGAAACGCT GCACGCGCTC
AATCCGCGGC TGGTTTACTG CGCAATCAGC GGATACGGCG CGAGCGGTCC ATTCGTCGAC
CATGCGGGAC ACGATCTGAA CTACATCGGC TACGCCGGCG TGCTCGATCA ACTGGCGGGC
CGTGACGGCG CGCCCATCCT GCCGAATTTC CAGATTGCCG ACCTGCTCGG CGGCGCGCTG
AGCGCGGTCA CGCAGATCCT CGCGGCGCTG TGGCATGTTT CGCGCGGCGG CGAGGGCCGC
TTCGTCGATG TCTCCATGAC ACATGTCACT TACGCGCACA ACGTGGTGGC TCAGGTATCG
CTCGCCAATG ATGGCGTGGC GCCCGGCGTC GGCGCCGGGC TGCTGAATGG CGGCGTGCCC
TGCTACAACC TGTACCGCAC GCTCGATAAC CGCTGGCTCG CGGTCGGCGC ACTTGAACTG
AAGTTCTGGG AAACGCTCTG CATGGCGCTC GACCGGCCCG AGTGGGCCAC GCGCCATTGG
AGTCTCGGCC AGGCGATCGG CGGCCCGGAC GCCGCCGCGC TCACGCAAGA ACTCGCCGAT
GTGATCGGCA AGCGTCCGCT GGAAGAATGG GTTTTGCTGC TGGAGCCGCT CGACTGCTGT
GTGTCGCCGG TGCTGACGGC GGCGGAAGCC GCGCGTCATC CGCTGTTCAA TCCGCAGGCT
TACGAGACGG CGGGCGCGGA CGGTGCAGAC GAGAAAGACA GGTTGATCAC CTAG
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| Protein sequence | MPGASAGSLA TGSAGSSANP SATASAASPA AASAGGSAAA SSGTPSAASS GTSRAASSAT
SRSKSSATSP ASGSAASPTA SAPPALQGLR VLDLTRLLPG PVAALRLAEL GADVLKIEAP
GAGDPTRTMM QSSSDRVAGR PGAFYRLVNR GKRETRLDLK SEAGRNVLCA LAAEADVLIE
SFRPGVMERL GLGYETLHAL NPRLVYCAIS GYGASGPFVD HAGHDLNYIG YAGVLDQLAG
RDGAPILPNF QIADLLGGAL SAVTQILAAL WHVSRGGEGR FVDVSMTHVT YAHNVVAQVS
LANDGVAPGV GAGLLNGGVP CYNLYRTLDN RWLAVGALEL KFWETLCMAL DRPEWATRHW
SLGQAIGGPD AAALTQELAD VIGKRPLEEW VLLLEPLDCC VSPVLTAAEA ARHPLFNPQA
YETAGADGAD EKDRLIT
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