Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2466 |
Symbol | |
ID | 6283310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 2782750 |
End bp | 2783967 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642622020 |
Product | succinyldiaminopimelate transaminase |
Protein accession | YP_001896086 |
Protein GI | 187924444 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.000138526 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAATCCGC TACTCGACTC CCTTCAGCCC TACCCGTTCG AAAAGCTGCG CGCGCTTTTC GCGGACGTCA CGCCGAGCGC CGGCCTCGCG CATATCAGCT TCGGCATCGG CGAGCCGAAA CATCCGACGC CCGAATTGAT CCGTGACGCC GTGGTGGCTT CGCTCGGCGG CTTGTCGTCG TATCCGGCCA CGATCGGATC GCCGGCGCTG CGCGAGTCGA TCGCGAAGTG GGTCACGCGG CGCTACAACC TGCCGCCGGT CGATCCGGCC ACCCAGGTGC TGCCGGTGTC GGGTTCGCGC GAGGCGTTGT TCGCGCTCGC CCAGACCGTG CTCGACCCGA AAAAGAATGC TGACGGCGAG CCTGCGATCG TACTCTGTCC GAACCCGTTC TACCAAATCT ACGAAGGCGC CGCGATTCTG GCCGGCGCGC AGCCGTACTT CGTGAATAGC GACCCGGCGC GCAACTTCGC CTGCGACTAT TCTGCGGTGC CGGCCGACAT CTGGGCGCGC ACGCAACTGC TGTATGTCTG CTCACCGGGC AATCCGACCG GCGCGGTGCT CACGCTCGAC GACTGGCGCG AACTGTTCGC GCTGTCGGAC CGCTACGGCT TCGTGATCGC TTCGGACGAG TGCTACTCCG AAATCTATTT CGACGAAGCC AACCCACCGC TCGGCGGCCT GGAAGCGGCG CACAAGCTCG GCCGAGGCTT CGAGCGCCTT GTGATGCTGT CGAGCCTGTC CAAGCGCTCG AACGTGCCGG GCATGCGCTC AGGCTTCGTC GCGGGCGACG CGGCGATTCT CAAGGACTTC CTGCTATACC GGACATACCA CGGCGCGGCC TTGTCGACGG TGTTCCAGAG TGCCAGCATC GTGGCCTGGA ACGACGAGAC GCACGTGCGC GAGAACCGCG CGAAGTACGT GCAGAAGTTT TCCACCGTCA CGCCGATGCT CGCCGAGGTG CTCGACGTGC GCCTGCCGGA CGCCGCGTTC TACCTGTGGG CGGACGTCTC GCGCACGGGC CTCACGGATA CCGAGTTCGC CCAGCGCCTC TACGCCGACT ATAATGTGAC GGTTCTGCCG GGCTCGTTCC TCGCGCGCAC TGCGCACGGC GTGAACCCCG GCCGCAATTT CGTGCGCATG GCGCTCGTCG CCGGCGTCGA CGAATGCACA CAGGGCGCGC AGCGAATCGT CGATTTTTGC CGCGCGCTGG CAGGTTGA
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Protein sequence | MNPLLDSLQP YPFEKLRALF ADVTPSAGLA HISFGIGEPK HPTPELIRDA VVASLGGLSS YPATIGSPAL RESIAKWVTR RYNLPPVDPA TQVLPVSGSR EALFALAQTV LDPKKNADGE PAIVLCPNPF YQIYEGAAIL AGAQPYFVNS DPARNFACDY SAVPADIWAR TQLLYVCSPG NPTGAVLTLD DWRELFALSD RYGFVIASDE CYSEIYFDEA NPPLGGLEAA HKLGRGFERL VMLSSLSKRS NVPGMRSGFV AGDAAILKDF LLYRTYHGAA LSTVFQSASI VAWNDETHVR ENRAKYVQKF STVTPMLAEV LDVRLPDAAF YLWADVSRTG LTDTEFAQRL YADYNVTVLP GSFLARTAHG VNPGRNFVRM ALVAGVDECT QGAQRIVDFC RALAG
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