Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2455 |
Symbol | rpsB |
ID | 6282463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 2766177 |
End bp | 2766929 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642622009 |
Product | 30S ribosomal protein S2 |
Protein accession | YP_001896075 |
Protein GI | 187924433 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0052] Ribosomal protein S2 |
TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0200265 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00181584 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAGTTA CCATGCGTCA AATGCTGGAA GCCGGTGTCC ACTTCGGTCA CCAAACCCGC TTCTGGAACC CGAAGATGGC CCCCTTCATT TTCGGTCATC GCAACAAGAT TCACATTATC AACCTCGAAA AGACGCTGCC GATGTACAAC GACGCGCTGA AGTACGCGCG TCAACTGGCA GCCAATCGCG GCACGATCCT GTTCGTCGGC ACGAAGCGTC AATCGCGCGA CACGATCGCT GAAGAAGCAC AACGCGCCGG CATGCCGTTC GTCAACGCGC GCTGGCTCGG CGGCATGCTG ACCAACTTCA AGACGCTGAA GGTCTCGATC AAGCGCCTGA AGGACATGGA GGCAGCGCTG GAGGCAGGCG AAACCGAACG CATGAGCAAG AAGGAAGCGC TCCTGTTCGA ACGCGAAATG GCCAAGCTGG TCAAGTCGAT CGGCGGCGTG AAAGACATGG GCGGCATTCC GGACGCGATT TTCGTGGTCG ACGTCGGCTA CCACAAGATT GCCGTGACCG AAGCGAACAA GCTCGGCATC CCGGTTATCG CCGTGGTCGA CACGAACCAC TCGCCGGAAG GCATCGACTA CGTGATCCCG GGTAACGACG ACGCCTCGAA GGCTGTCGCT CTGTACACGG CTGGCGTGGC TGACGCGATC GTCGAAGGCC GTGCGAACGC GGTCAACGAA GTGGTGCAAG CTGCACGTGG TGGCGACGGC GACGAGTTCG TCGAGGTCAA CTCGGAAGCG TAA
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Protein sequence | MAVTMRQMLE AGVHFGHQTR FWNPKMAPFI FGHRNKIHII NLEKTLPMYN DALKYARQLA ANRGTILFVG TKRQSRDTIA EEAQRAGMPF VNARWLGGML TNFKTLKVSI KRLKDMEAAL EAGETERMSK KEALLFEREM AKLVKSIGGV KDMGGIPDAI FVVDVGYHKI AVTEANKLGI PVIAVVDTNH SPEGIDYVIP GNDDASKAVA LYTAGVADAI VEGRANAVNE VVQAARGGDG DEFVEVNSEA
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