Gene Bphyt_2419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2419 
Symbol 
ID6283156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2723595 
End bp2724074 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content60% 
IMG OID642621973 
Productalkylhydroperoxidase like protein, AhpD family 
Protein accessionYP_001896039 
Protein GI187924397 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.797852 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGC GTATCAACTA CATCCAGCAA TCGCCGGAAC TCTTCAAGAA ATTCCTCGAA 
TTCAGCAATC AGCTGAAGGA CTGCGTGCTC GAAGAGTCGA TCCGCGACCT CGTTTCGCTC
CGGGCGTCGC AGATCAATGG CTGCGGCTTT TGCGTCGATA TGCATGTGAA GGAAGCACGC
TTGCACGGAG AGCGCGAGCT GCGTCTGCAC CATGTCGCGA TCTGGCGCGA GTCGACGCTT
TTCGCGCCGC GGGAGCGCGC CGCGCTCGCG TGGACTGAAG CTCTGACGAA GCTTGCCGAA
CATGGCGTTT CCGACGATAT CTACCAGCAC GTGCGCACCC AGTTCTCCGA GAAGGAACTG
TCGGACCTGA CGTTCGAAGT GATGGCGATC AACGGCTGGA ATCGCGCGAG CATCGCGTTC
AAGGCCGTGC CGGGTTCGGC CGACAAGGCA TTTGGGCTCG ACAAGGCGAA TCTCGCCTGA
 
Protein sequence
MTQRINYIQQ SPELFKKFLE FSNQLKDCVL EESIRDLVSL RASQINGCGF CVDMHVKEAR 
LHGERELRLH HVAIWRESTL FAPRERAALA WTEALTKLAE HGVSDDIYQH VRTQFSEKEL
SDLTFEVMAI NGWNRASIAF KAVPGSADKA FGLDKANLA