| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2332 |
|---|
| Symbol | |
|---|
| ID | 6283443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 2630313 |
|---|
| End bp | 2631053 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642621889 |
|---|
| Product | transcriptional regulator, GntR family |
|---|
| Protein accession | YP_001895955 |
|---|
| Protein GI | 187924313 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1802] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.738063 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGACA CAGACTCCGC CGCTGCGAAT AGTTCGAAAC CCGAAGCGAT CGCCGAGCGC
ATCCGCGCGG CGATCCTCGA GCATCGGCTC GCGCCGGGCG CCAAGTTGAC AGAAGCCCAG
TTGTGCGAAG TATTCGGTGT GAAGCGCGGC CCGATCCGGC AGGCGCTGGC GCAGTTGGCC
ACCGACCACC TTGTCGATCT CGAACCGAAT CGCGGAGCGT TCGTGGCAAG TCCGTCGCTG
CAGGAAGTGC ACGAAGTGTT CGAGATGCGT CGCATCATCG AGCTTGCGGT GGTCGAAAAG
ATCTGCAGCG GCCACGGCAT GCGGCGGTTG AAGAGCATCG GCAGCATGAT CGGCCGGGAA
CGCAAAGCGT TTGAAACACG TGATTTTCCA GCGTGGATTC GTCTGTCGGG CGAGTTTCAC
ACCGAGTTGG CGGGCCTCAC GGGCAACGCC GTGTTGTGCG ACTGCCTGAA CGGCCTGGTA
GCGCGCTCCA CGCTGATTTC CGCGCTGTAC GAGTCGCTCG GACGCAGCCC ATGCTCGTTC
GAGGACCACG AAGCTATTCT CGCCGCGCTC GACGCCGGCG ATGCAAAAGA GGCGGCGGCA
TTGATGTCGC GCCATTTGCA AAGCGTCGAG TTGAAGATGC TGGACCGCCC CGCACGCGGC
GCGGCCGATC TGCATGAAGT GTTCGGCGCA CTCAACGGTG CAGCCAGAGA TTCATCGAAG
ACCAAGTCCG CGCCAGGCTG A
|
|---|
| Protein sequence | MSDTDSAAAN SSKPEAIAER IRAAILEHRL APGAKLTEAQ LCEVFGVKRG PIRQALAQLA
TDHLVDLEPN RGAFVASPSL QEVHEVFEMR RIIELAVVEK ICSGHGMRRL KSIGSMIGRE
RKAFETRDFP AWIRLSGEFH TELAGLTGNA VLCDCLNGLV ARSTLISALY ESLGRSPCSF
EDHEAILAAL DAGDAKEAAA LMSRHLQSVE LKMLDRPARG AADLHEVFGA LNGAARDSSK
TKSAPG
|
|---|
| |