| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2231 |
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| Symbol | |
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| ID | 6281630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2512895 |
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| End bp | 2514469 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642621788 |
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| Product | threonine dehydratase |
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| Protein accession | YP_001895854 |
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| Protein GI | 187924212 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.485473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCGTTAC ACCAACTCAA ACAGGTGGCC GAAGCCGCCG ATAGCGTCGC GCTGCGCCAC
GACTACCTGA AAAAAACCCT GACCGCGCGC GTCTACGACG TGGCCCGCGA GACCGAACTC
GAACGCGCGC CGAATCTGTC GGCACGTCTG CGCAATCCGG TCTATCTGAA GCGCGAGGAC
AACCAGCCGG TGTTCTCGTT CAAGGTGCGC GGCGCGTACA ACAAAATGGC GCATATTTCC
GCTGAAGCGT TGGAACGTGG GGTGATTACG GCGTCGGCGG GCAATCATGC GCAGGGCGTG
GCGCTGTCGG CGGCGCGTAT GGGCGTGAAA GCGATCATCG TGGTGCCGGT TACGACGCCG
CAGGTGAAGG TCGACGCGGT GCGCGCGCAC GGCGGCCCGA CCGTCGAAGT GGTGCAGTTC
GGCGAATCGT ATAGCGACGC GTATGAGCAC GCAGTAAAGC TGCAAAAAGA GCGCGATCTG
ACCTTCGTGC ATCCGTTCGA CGATCCGTAT GTGATCGCCG GCCAGGGCAC CGTGGCGATG
GAAATTCTCA GCCAGCATCA GGGGCCGATT CACGCGATCT TCGTGCCGAT CGGCGGCGGT
GGACTGGCGG CGGGTGTGGC TGCATACGTG AAATCGGTGC GGCCCGAGAT CAAGGTGATC
GGCGTGCAGA CCGATGATTC GTGTGCAATG GCAGCATCGC TGAAAGCCGG TGAGCGGGTC
ACGCTGAATG AGGTCGGTCT GTTCTCGGAC GGCACGGCGG TGAAACTCGT CGGTGAAGAA
ACCTTCCGCC TGTGCAGCGA ATATCTCGAC GACGTGCTGC TCGTGAATAC CGACGCGCTC
TGCGCCGCGA TCAAGGACGT CTTCCAGGAC ACCCGCAGTG TGCTGGAGCC CGCGGGCTCG
CTGGCCGTGG CCGGCGCCAA GCAGTATGCG GAGCGCGAAG GCATCGAGAA CCAGACGCTG
ATCGCGATCA CGTCGGGCGC GAACATGAAT TTCGACCGCA TGCGCTTCGT GGCCGAGCGC
GCCGAAGTCG GCGAAGCGCG CGAAGCGGTG TTCGCCGTGA CGATCCCCGA AGAGCGCGGC
AGTTTCCGCC GCTTCTGCGA ACTGGTCGGC ACACGCAGCG TCACCGAATT CAACTATCGT
ATTGCGGATG CGAACTCCGC CCATATCTTC GTGGGCGTGC AGATCAGGAA TCGCAGCGAG
TCGGCGCAGA TCGCGGGCGC GTTTGAAGCG CACGGCTTCG CCACCGTCGA TCTGACGTTC
GACGAACTCT CCAAGCAGCA CATCCGCTAC ATGGTCGGCG GGCGCTCGCC CTTGGCACAC
GACGAACGTC TGTTCCGCTT CGAGTTTCCC GAACGGCCAG GCGCGCTGAT GAAATTCCTT
TCGTCGATGG CGCCGAACTG GAACATCAGC CTGTTCCACT ATCGCAACCA GGGCGCGGAC
TATAGCTCGA TTCTGGTCGG CATCCAGGTG CCGGATAGCG AGAACGAGGC GTTCAACAAG
TTTCTCGCCA CGCTCGGCTA TCCGAACTGG GAAGAGACGC AGAACCCGGT GTATCGACTG
TTTCTTGCGT CGTAG
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| Protein sequence | MSLHQLKQVA EAADSVALRH DYLKKTLTAR VYDVARETEL ERAPNLSARL RNPVYLKRED
NQPVFSFKVR GAYNKMAHIS AEALERGVIT ASAGNHAQGV ALSAARMGVK AIIVVPVTTP
QVKVDAVRAH GGPTVEVVQF GESYSDAYEH AVKLQKERDL TFVHPFDDPY VIAGQGTVAM
EILSQHQGPI HAIFVPIGGG GLAAGVAAYV KSVRPEIKVI GVQTDDSCAM AASLKAGERV
TLNEVGLFSD GTAVKLVGEE TFRLCSEYLD DVLLVNTDAL CAAIKDVFQD TRSVLEPAGS
LAVAGAKQYA EREGIENQTL IAITSGANMN FDRMRFVAER AEVGEAREAV FAVTIPEERG
SFRRFCELVG TRSVTEFNYR IADANSAHIF VGVQIRNRSE SAQIAGAFEA HGFATVDLTF
DELSKQHIRY MVGGRSPLAH DERLFRFEFP ERPGALMKFL SSMAPNWNIS LFHYRNQGAD
YSSILVGIQV PDSENEAFNK FLATLGYPNW EETQNPVYRL FLAS
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