| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2227 |
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| Symbol | |
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| ID | 6283204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2507873 |
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| End bp | 2509036 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642621784 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001895850 |
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| Protein GI | 187924208 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0459424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACACCC ACAAGGCTCA GAAGCTGATG TGCGCCGTAG CACTAGGAGG GTTGGCTGGC
GCGGCCCACG CGCAGAGCAG CGTGACTCTT TATGGATTGA TCGACGCCGG CATCAGCTAC
GTCAACCATG CGCAGAACGC CTCCGGCGGC AGTTCCAGCC TGGTCAAGTT CGACGACGGC
ATCAACGGCG GCAACCGCTG GGGTTTGAAG GGCGCGGAAG ATCTGGGCGG CGGTTATAAG
GCCATTTTCA CGTTGGAAAG TGGCTTTGGT CTTGCCGACG GTTCGATCAG CCAGGGCGGC
GCGCTGTTCG GCCGGCAGGC TTTCGTGGGC ATATCCAGAA GCGGCGTAGG CTCGTTCACG
ATGGGCCGCC AGTATCCGTT CTCGCACGAC TACCTGAACC GCTATTCGAC CGGCGGCCTC
ACTGCCGGCG ACGCTTACGC GTATCACATC GACACGCTCG ATCTGCTGAC CTCGGTGCGG
ATCAACAACT CGGTGAAATT CGACAGCGTG CGCATGTACG GCTTCAAGGT CGGCGCCATG
TACGGCTTTT CGAATGCGGC GGGCGAGTTT GGCGGCTCGG ACGGCGACAA CGGCAAGGGC
GGCTCGTCAC GGACCTACAG CTTCGGCGTC GACTACAAGA ATGGGCCGTT CAGCATGGGC
TTCGCCTATA CGGACATCAC GTATCCGTTG CAGGAAGTGC CCCCGCTCAA ACTGACGCTC
GCCAATCTGG ATCCGCTTGG CGAACGGGAT TTGCGCACCT TGGGTCTGGG CGCCAAATAT
CAGTTCGGCA AGGTACTCGG CTACGCGCTA TGGACCAACA CCCGGCTCGA GAACCTGGAC
CACACGGCCG CTACGCTGAA CATTTACGAG GGCGGCGTGG TGTATCAGGT CACCGCGCCG
CTGGAGGCCG CGTTGGGCTA TACGCGTACT CAGGTTCGAG GGTCGTCGAC GGGCACGTGG
AACCAGATCA ACAGCAGTGT CGAGTATTCG CTGAGCAAGC GCACCAGCGT GTATGCGCTC
GCCATTTACC AGAAGGCGTC CGGGAACAAC GACGGTGTGC CGGTTCAGGC AATGATCGGC
AAATCGACGA GCTACTTCGG CAACTCGGGC AGCGATGCGC AGAACCAATT GGCTTTCCGG
ATCGGCATGC GGCATCGGTT TTGA
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| Protein sequence | MNTHKAQKLM CAVALGGLAG AAHAQSSVTL YGLIDAGISY VNHAQNASGG SSSLVKFDDG
INGGNRWGLK GAEDLGGGYK AIFTLESGFG LADGSISQGG ALFGRQAFVG ISRSGVGSFT
MGRQYPFSHD YLNRYSTGGL TAGDAYAYHI DTLDLLTSVR INNSVKFDSV RMYGFKVGAM
YGFSNAAGEF GGSDGDNGKG GSSRTYSFGV DYKNGPFSMG FAYTDITYPL QEVPPLKLTL
ANLDPLGERD LRTLGLGAKY QFGKVLGYAL WTNTRLENLD HTAATLNIYE GGVVYQVTAP
LEAALGYTRT QVRGSSTGTW NQINSSVEYS LSKRTSVYAL AIYQKASGNN DGVPVQAMIG
KSTSYFGNSG SDAQNQLAFR IGMRHRF
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