Gene Bphyt_2189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2189 
Symbol 
ID6283909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2469047 
End bp2470411 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content66% 
IMG OID642621747 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001895813 
Protein GI187924171 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCGA TTCGCCGCTG GCTTCTGGGC TGGCTGATCT TCGGTCTGGC GGCGGCCTCG 
GGCGTGGCCG GCTACGCCAT CTTCCACACG GCGCGCGAGG AAGCGAGCGA ACTGTTCGAC
TTCGAACTGC GCACGATCGC ACTGTCATTG CCGTCGAATC TAGCCGGCGC GGGCGACGGC
GAACATCGCG ATCCCGACCT GGGCGGTCTG GCCGACGACC GGGTCGTCAT CGAGATCTGG
GACGGCGCCG GCAAGCTGAT CTATCACTCG CTGCAGGCGC CGGTATTCGA GCGCCAGCCC
GCGGGCTACA ACACGGTGGA GCGCGGCGAG TATCACTGGC GTACATTCGC CGTGCAGCAG
GGGGAACGCT ATATTCAAGT GGCGCAACCC ATTTCCGTGC GCGAGGACCT CGCGATGCGA
CTTGCGCTGC ACACGCTCTG GCCGCTCGGC GTGCTGGTGC CGGCGACAAT CGTGCTGGTG
CTGCTGGTAG TGGCGCGCGG GCTCGCGCCG ATCGGCGGGC TGTCGCGCGC GCTGTCCACC
CGTACGATCG ATTCGCTGGA ACCGTTGCGC CTGGACGGCA GCGTGCCGGT CGAGATCAAG
CCGCTGGTCG AAGCGCTCAA CGATCTGCTG CAGCGGTTGC ACACGGCGTC GCAGGCGCAA
CGCACGTTCA TCGCCGATGC CGCGCACGAA TTGCGCTCGC CGCTTGCCGC ATTGAAGCTG
CAATTGCAGG CCGCTTCGCG CGACGGTTCG TTAAAGGGCG AAGGGCAAAC GCTCGAACGC
GTCGAAGGGC GCGTCAACCG CATCATTCAT CTGGTGCAGC AACTGCTGAC GCTGGCGCGC
GAAGACGCGC ATCCGGTCAC GTCGATGGTG CCGGTCAGCC TGCGCCGGAT CGGCGAGCAG
GCGGTGGGCG ATTTTTCGCT GCTGGCGGAA ACGAAGGAGA TCGACATCGG CCTGGAGTGT
GAGGGCGCGC GCTCGGAGGG CGATGCTTAT ACCGTGCTGG CCGAGCCGCA TGGCATGAGC
GTGCTGCTGG GCAATCTGAT CAACAACGCG ATCCGGCACA CGCCGCGCGG CGGCCGTGTC
GATGTGATCC TCAAGCGTGA CGGTACGCGC GTCGGCTTCG AAGTCGCCGA TACCGGCTCG
GGCATTCCGG AGGCCGAACT CGAACGGGTC TTCGACCGTT TCTATCGCGG CGAAGAGGCG
CAAGGCGAGG GCAGCGGTCT TGGGCTCGCG ATCGTATCGC GCATCGCCGA GCGGCATCAG
ATGGATCTGT CTCTGTGCAA CAACGAAGGC CAGCCTGGCT TGCGGGTGTC CGTGTCCGGT
CTGAAGGCGC ATGACGCCGG CGCGCCCGTG GCCCTTAAAA CCTGA
 
Protein sequence
MTSIRRWLLG WLIFGLAAAS GVAGYAIFHT AREEASELFD FELRTIALSL PSNLAGAGDG 
EHRDPDLGGL ADDRVVIEIW DGAGKLIYHS LQAPVFERQP AGYNTVERGE YHWRTFAVQQ
GERYIQVAQP ISVREDLAMR LALHTLWPLG VLVPATIVLV LLVVARGLAP IGGLSRALST
RTIDSLEPLR LDGSVPVEIK PLVEALNDLL QRLHTASQAQ RTFIADAAHE LRSPLAALKL
QLQAASRDGS LKGEGQTLER VEGRVNRIIH LVQQLLTLAR EDAHPVTSMV PVSLRRIGEQ
AVGDFSLLAE TKEIDIGLEC EGARSEGDAY TVLAEPHGMS VLLGNLINNA IRHTPRGGRV
DVILKRDGTR VGFEVADTGS GIPEAELERV FDRFYRGEEA QGEGSGLGLA IVSRIAERHQ
MDLSLCNNEG QPGLRVSVSG LKAHDAGAPV ALKT