| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2127 |
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| Symbol | |
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| ID | 6282995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2400979 |
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| End bp | 2402520 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642621686 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_001895752 |
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| Protein GI | 187924110 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACGC GTGACTTCTC CCTGCGCACA CCGGCGCTCG CGCTGCTGCT GTGCTCGATG
CTCACGGGCT GTCTGGTGGG CCCGAACTTC GAACCTCCGC AGACGGCCAC GCCCGACGTA
TTCAACCGCA CCCAGACCGC ACAGGCCGCA AGCAAGGCCG TCGAATCCGG ATTCACACCG
CAATGGTGGA CGCTGTTCAA CGATCCGATA CTGGACTCGC TGGAACAGCA ATTGAGCGAT
GCGAATCTCG ATGTGGCGGC TGCGTCGGCG CGTCTGCGGC AAAGCCGGGC GCAACAGCGC
ATTGCCGGCG CCGAAGAATA TCCGGCGCTC AACGGCGCCG CCTCTTACGA CCGCGAGCGC
GGCAGTCCGA ACGGCATTCT CTCGCTGCTT GGTGTCACGC CGACAGGAAG CCAGACGCAG
TCGGCCTCGG GCAGTGCACC GCTCGGTGTC GCGCCGTTGC CGGGCGCCAA AGGCTCGCCC
GCTTACGATC TGTACCAGTT CGGCTTCGAC GCGTCATGGG AACTCGACTT CTGGGGGCGC
GTACGACGCG GTGTCGAGGC CGCATCGGCG CTCTCCGATG CATCGTACGA GGACCGCAAC
GCGATCCTGC TGTCCGCCCG CGCCGAACTC GCGCGCGACT ACATCCAGTT GCGCGACACG
CAGGCCCTGC TGCAGATCGC GAAACAGAAC CTCGACATCG CGCACGACGT CACCAAGCTC
ACGCAAAACC GGGTGCATGA AGGTGTGACG ACGGACCTGG ACGTCGCCAA TGCGATGGCC
CAGGCGGAGT CGATCGAAAG CCTGATCCCG ACGCTCGAAT CGCGCAACAC GACCACGATC
AATGCGATCG GCGTGCTGCT GGCGAAAGAA CCGGGCGCAT TGCAGCAGAT GCTCGCCGAG
CCGCACGATG TGCCGGCGCT GCCCGATCAG GTGCCGATTG GCGTTCCGTC GGAACTGGTG
CAGCGCCGGC CCGACATCCG CAAAGCCGAG GCCCAGCTGC ATGCGGCCAC CGCGACGATC
GGCATGGCCA AGGCCGACTT CTATCCGCGC ATTTCGCTGA ACGGCAGCGC CGGGTTCCAG
AGCCTGCAAC TGTCGAATCT CGCCGACTGG GCGTCCGGCC AGTTTGTCGT GGGACCGTCC
ATCACGTTGC CGATATTCGA AGGCGGACGC CTCAAAGGCA CGCTGCATTT GCGCGAGGCG
CAGCAGCAGG AAGCGGCGAT TGTCTACCAG CACACCGTGC TTCAGGCATG GCGTGAGGTG
GACGACGCGC TGGTCGTCTA TGACGCCGAA CAGCGGCGGC GCGACCGGCT GAAAACGGTT
GTGAGTCTGA ACCAGCGCGC GCTGTCGATT GCGCAGCAAC GGTACAAGGC AGGTGCGGTG
GATTTCCTGG ATGTGCTGAA CGTGCAGAAA CAGTTGCTCG ATGCGCAGAG CAACCTCGAG
CAGAGCAAGG CCGACGCTGA CGCGAACCTC ATCACGCTGT GCAAGGTGCT CGGTGGTGGA
TGGGAATCAA CGTATGCAAG GCAAGACAGT TCTCGTCGAT AA
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| Protein sequence | MNTRDFSLRT PALALLLCSM LTGCLVGPNF EPPQTATPDV FNRTQTAQAA SKAVESGFTP
QWWTLFNDPI LDSLEQQLSD ANLDVAAASA RLRQSRAQQR IAGAEEYPAL NGAASYDRER
GSPNGILSLL GVTPTGSQTQ SASGSAPLGV APLPGAKGSP AYDLYQFGFD ASWELDFWGR
VRRGVEAASA LSDASYEDRN AILLSARAEL ARDYIQLRDT QALLQIAKQN LDIAHDVTKL
TQNRVHEGVT TDLDVANAMA QAESIESLIP TLESRNTTTI NAIGVLLAKE PGALQQMLAE
PHDVPALPDQ VPIGVPSELV QRRPDIRKAE AQLHAATATI GMAKADFYPR ISLNGSAGFQ
SLQLSNLADW ASGQFVVGPS ITLPIFEGGR LKGTLHLREA QQQEAAIVYQ HTVLQAWREV
DDALVVYDAE QRRRDRLKTV VSLNQRALSI AQQRYKAGAV DFLDVLNVQK QLLDAQSNLE
QSKADADANL ITLCKVLGGG WESTYARQDS SRR
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