| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2114 |
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| Symbol | |
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| ID | 6282834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2381250 |
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| End bp | 2382869 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642621673 |
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| Product | Mammalian cell entry related domain protein |
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| Protein accession | YP_001895739 |
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| Protein GI | 187924097 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3008] Paraquat-inducible protein B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAGCC CACAAGGACC CGCCCTGCCG CCCGATCTGC CCGATCCCGA TATCGTGCCG
CGGCGCGGCT GGTTGCCCTC GCTCGTCTGG GTCGTGCCGC TGATCGCGGC GTTGATCGGT
CTCGCGCTGG TCGTCAGGGC GGTCACGGAG CGCGGCCCGG CAATCACCAT CGTCTTCGAC
AACGCCGAAG GCCTCGAACC CGGCAAGACC CAGGTCAAGT ACAAGGACGT CGAAATCGGT
TCGGTGAAGT CGATCACGCT GTCGAAGGAT CGCACGCACG TGCAGATCGC CGTGCAACTC
ACCAGGCAGG CAGAGAACTT CGCTGTCAAG GACACCCGCT TCTGGGTGGT GCGCCCTCGC
GTAGGCGCCG CCGGCGTGTC GGGCATCGGC ACACTGCTCT CGGGCGCGTA TATCGGCGTG
GATGTCGGCC GCTCGACGGA GACGCGAACC GAGTTTGTCG GGCTGGAGAC GCCGCCGCCC
ATCACCGCCG CCCAGAAAGG CCACCGCTTC ACGTTGCACG GCGATTCGCT CGGCTCGATC
GATATCGGCT CGCCGATTTT CTACCGGCGC GTGCAGGTGG GTCAGGTCTA CGGCATTTCG
CTCGACAAGG ACGGCACGGG CGTGACCATG CAGGTGTTCG TCGCCGCGCC GTACGATCAG
TACGTCGGCT CGAATTCGCG CTGGTGGCAT GCGAGCGGCG TGGACGTGCG GCTCGATTCG
ACCGGCTTTG TCGTCAACAC GCAGTCGCTT GCGGCGATTC TGGTCGGCGG GCTCGCCTTC
CAGACGCCGC CAGGTCAGCC GATGGGCACG CCGGCCGCGG AGAAAACCGA CTTCCGGCTC
GCCGCCGACG AAGTGGACGC CATGCGCGCG CCAGACGGCA TACGGGTACG CACCGTGATG
GTCTTCAGTC AGTCGCTGCG CGGACTGTCG GTGGGCGCGA CGGTCGACTT CCGGGGCATC
GTGCTGGGCC AGGTCACGGA CATCGGCGTC GAATACGATC CGCAAGCGCG CAGCTTCGTC
ATGCCGGTGA CGCTGGATCT GTACCCTGAC CGCCTGCGCC GGCGGTCCCG CGGCGCGGCC
ATGCCCGAGG CGGGTACCGC GGCCAGCCAC GAACTGTTGC GGCGTCTCGT CGAGCGCGGC
TTGCGTGGGC AATTGCGCAC CGGCAACCTG CTGACGGGCC AGTTGTACAT CGCGCTCGAC
ATTTTCCCCA ACGCCGCGCC CGTCAAGTTC GACACCACTA ACGAGCCGAT CCAGCTGCCG
ACCATTCCAA ACACGCTCGA CGCGTTGCAA ACGCAGGTGG CCGACATCGC GAAGAAGCTC
GACCGGATTC CGTTCGATCA GCTCGGTTCG AATCTGAACA CGTCGCTTAA AAACGCCGAC
GCGCTGTTCA ACCGGCTCAA CAACGAAGTC GTGCCGCAGG CGCGCGACAC GCTCGCTGCC
GCGCGGCAAA CCTTCGGCTC GGCCGAGGCG ACTTTGCAAC AGGACTCGCC GTTGCAGTCC
GACGTGCATC AGGCGCTGCA GGAGTTGACC CGCACGCTAC GATCGCTGAA CGCGCTAGCC
GATTATCTGG AGCGCCATCC GGAGTCGCTG GTGCGCGGCA AACCGGGAGA CAAGCCATGA
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| Protein sequence | MSSPQGPALP PDLPDPDIVP RRGWLPSLVW VVPLIAALIG LALVVRAVTE RGPAITIVFD
NAEGLEPGKT QVKYKDVEIG SVKSITLSKD RTHVQIAVQL TRQAENFAVK DTRFWVVRPR
VGAAGVSGIG TLLSGAYIGV DVGRSTETRT EFVGLETPPP ITAAQKGHRF TLHGDSLGSI
DIGSPIFYRR VQVGQVYGIS LDKDGTGVTM QVFVAAPYDQ YVGSNSRWWH ASGVDVRLDS
TGFVVNTQSL AAILVGGLAF QTPPGQPMGT PAAEKTDFRL AADEVDAMRA PDGIRVRTVM
VFSQSLRGLS VGATVDFRGI VLGQVTDIGV EYDPQARSFV MPVTLDLYPD RLRRRSRGAA
MPEAGTAASH ELLRRLVERG LRGQLRTGNL LTGQLYIALD IFPNAAPVKF DTTNEPIQLP
TIPNTLDALQ TQVADIAKKL DRIPFDQLGS NLNTSLKNAD ALFNRLNNEV VPQARDTLAA
ARQTFGSAEA TLQQDSPLQS DVHQALQELT RTLRSLNALA DYLERHPESL VRGKPGDKP
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