| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2078 |
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| Symbol | |
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| ID | 6281379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2344372 |
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| End bp | 2346633 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642621639 |
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| Product | catalase/peroxidase HPI |
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| Protein accession | YP_001895705 |
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| Protein GI | 187924063 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0376] Catalase (peroxidase I) |
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| TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.582232 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAGCG AAGCAAAGTG CCCGTTCAAC CATGCCGCTG GCGGCGGCAC GACGAACCGC
GACTGGTGGC CCAAGCAACT GCGGCTGGAT CTGCTGAGCC AGCACTCCAG CAAGTCGGAC
CCGCTGGACG GCAGCTTCAA CTACGCCGAG GCTTTCAAAA CCCTCGATCT GGCCGCGGTG
AAAAAAGACC TCGCCGCGCT GATGACCGAT TCGCAGGACT GGTGGCCAGC CGACTTCGGC
CACTACGGTC CGCTCTTCAT CCGCATGGCC TGGCACAGCG CCGGCACGTA CCGTATCGGC
GACGGCCGCG GCGGCGCAGG GCGCGGTCAG CAGCGTTTCG CGCCGCTCAA CAGCTGGCCG
GATAACGTCA GCCTCGATAA GGCGCGCCGC CTGCTCTGGC CGATCAAGCA GAAGTATGGC
CAGAAGATTT CCTGGGCCGA TCTGCTGATC CTGACCGGCA ACGTCGCGCT CGAAACCATG
GGCTTCAAGA CCTTCGGCTT CGCCGGCGGC CGCCCCGACA CATGGGAGCC GGATCAGGAC
GTCTACTGGG GCAACGAAAA GACCTGGCTG GGCGGCGACG TCCGCTATGG CAAGGGCGCC
GCGGGCAATG AAGAGGACGG CGGCGTGATC GTCGCCGACG TGGAAAAGCA CGGCGAAGAG
GTCAGCCGCG ACGACAACGG ACGCATCCTG GAAAATCCGC TGGGCGCCGT GCAGATGGGC
CTGATCTACG TCAACCCGGA AGGTCCGGAC GGCAATCCGG ACCCGCTTGC CGCCGCGCAT
GACATCCGCG AAACCTTCGC TCGCATGGCC ATGAACGACG AGGAAACCGT CGCGCTGATC
GCCGGCGGGC ACACTTTCGG CAAGACGCAC GGAGCCGGTC CGGCCGATAA CGTCGGTCCC
GAACCCGAGA GCGCGGAACT CGAGGAACAG GGGCTAGGCT GGAAGAACAG TTATGGCTCC
GGCAAGGGCG CCGACACCAT CACGAGCGGC CTTGAAGTCA CCTGGACCAC CACGCCGACG
AAGTGGAGCA ACAACTTCTT CGAGAATCTG TTCAAGTACG AATGGGAACT GACCAAGAGC
CCGGCCGGCG CCAATCAATG GGTCGCCAAA GGTGCCGACG AAACGATCCC GCACGCTCAC
GATCCCTCGA AGAAGCAGCG CCCGACCATG CTCACCACCG ACCTCTCGCT GCGCTTCGAT
CCGGCCTACG AGAAGATTTC GCGGCGCTTC CTGGAAAATC CCGATCAGCT CGCCGACGCC
TTCGCGCGCG CATGGTTCAA GCTGACGCAC CGCGACATGG GACCGCGCGC CCGCTATCTC
GGACCGGAAG TGCCCGCCGA AGAACTGATC TGGCAAGACC CGATTCCGGC AGTCAACCAC
CCGCTGGTCG ACGAACAGGA CATCGCCTCG CTCAAGCAAA AGATCCTGGC CTCGGGGCTG
TCGGTGTCGC AACTGGTGTC GACTGCCTGG GCGTCGGCGT CCACGTTCCG CGGCTCGGAC
AAGCGCGGCG GCGCCAACGG TGCGCGTATC CGCCTCGCTC CGCAGAAAGA TTGGGCGGTC
AACCAGCCCG AGCAGTTGTC GAAGGTGCTG AAGACGCTCG AAGGCATCCA GAGCGAGTTC
AACGGCGCGC AGTCCGGCGG CAAGAAGGTG TCGCTCGCCG ACCTGATCGT GCTGGCCGGC
AGTGCGGGCA TCGAGCAGGC GGCAAAGAGC GCCGGCCATC AGGTGACGGT GCCGTTTGCG
CCGGGACGCA TGGACGCGTC ACAGGACCAG ACCGATGTGG AGTCCGTCGG CGCGCTCGAA
CCCGTCGCCG ATGGTTTCCG CAATTACGTG AGGAGCGACA TCAAGGTCCC GCCTGAGGCA
TTGCTGATCG ACAAGGCGCA ATTGCTGACG CTAACAGCGC CGGAAATGAC GGTGCTGATC
GGTGGGCTGC GCGCGCTGAA CGTCGGGACC GGGCAGAATC CGCAAGGCGC CTTTACCGAC
AAGCCGGAAA CGCTGACCAA CGACTTCTTC CGCAACCTGC TCGACATGGG TACGGAATGG
AAACCGACCT CGCCGGCCCG TCACGCCTTC GAGGGGCGCG ACGCCAAAAC TGGTTCGGTA
AAGTGGACCG GCAGCCGCGT CGATCTGGTG TTTGGTTCGC ATGCCCAGTT GCGGGCGCTC
TCCGAGGTCT ATGCAAGCGA GGACGGCAAG GAGAAATTCG TCCGCGACTT CGTCGCCGCA
TGGGTCAAGG TGATGAACCT CGACCGCTTC GACCTCGCCT GA
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| Protein sequence | MSSEAKCPFN HAAGGGTTNR DWWPKQLRLD LLSQHSSKSD PLDGSFNYAE AFKTLDLAAV
KKDLAALMTD SQDWWPADFG HYGPLFIRMA WHSAGTYRIG DGRGGAGRGQ QRFAPLNSWP
DNVSLDKARR LLWPIKQKYG QKISWADLLI LTGNVALETM GFKTFGFAGG RPDTWEPDQD
VYWGNEKTWL GGDVRYGKGA AGNEEDGGVI VADVEKHGEE VSRDDNGRIL ENPLGAVQMG
LIYVNPEGPD GNPDPLAAAH DIRETFARMA MNDEETVALI AGGHTFGKTH GAGPADNVGP
EPESAELEEQ GLGWKNSYGS GKGADTITSG LEVTWTTTPT KWSNNFFENL FKYEWELTKS
PAGANQWVAK GADETIPHAH DPSKKQRPTM LTTDLSLRFD PAYEKISRRF LENPDQLADA
FARAWFKLTH RDMGPRARYL GPEVPAEELI WQDPIPAVNH PLVDEQDIAS LKQKILASGL
SVSQLVSTAW ASASTFRGSD KRGGANGARI RLAPQKDWAV NQPEQLSKVL KTLEGIQSEF
NGAQSGGKKV SLADLIVLAG SAGIEQAAKS AGHQVTVPFA PGRMDASQDQ TDVESVGALE
PVADGFRNYV RSDIKVPPEA LLIDKAQLLT LTAPEMTVLI GGLRALNVGT GQNPQGAFTD
KPETLTNDFF RNLLDMGTEW KPTSPARHAF EGRDAKTGSV KWTGSRVDLV FGSHAQLRAL
SEVYASEDGK EKFVRDFVAA WVKVMNLDRF DLA
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