| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2047 |
|---|
| Symbol | |
|---|
| ID | 6282216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 2312928 |
|---|
| End bp | 2315513 |
|---|
| Gene Length | 2586 bp |
|---|
| Protein Length | 861 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642621612 |
|---|
| Product | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase |
|---|
| Protein accession | YP_001895678 |
|---|
| Protein GI | 187924036 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1049] Aconitase B |
|---|
| TIGRFAM ID | [TIGR00117] aconitate hydratase 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00000182438 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGAAA ACTTTCGCGC TCACGCAGCC GCACGCGCCA CGCTCGGTAT TCCTCCCCTG
CCGTTGACCG CCCAGCAGAC CGCCGAACTG GTCGAGTTGC TTACCAACCC GCCCGCAGGC
GAAGAGCAAA CCCTGCTCGA TCTGATCACC AACCGCGTGC CCGCCGGCGT CGACGAAGCC
GCCCGCGTGA AGGCCGGTTT CCTGGCCGCC GTCGCCAAGG GTGAAACCAC CTGTGCGCTG
ATCTCGCGCG CTCGCGCCAC GGAACTGCTC GGCACCATGC TGGGCGGCTA CAACATCCAG
CCGCTGATCG AACTGCTGTC GGACGCGGAA GTCGGCACGG TCGCCGCCGA GGCGCTGAAG
AAAACCCTGC TCATGTTCGA CGCGTTCCAC GACGTCAAGG AATTGGCCGA CAAGGGCAAC
GCCAACGCGA AGGCCGTGTT GCAAAGCTGG GCCGACGCCG AATGGTTCAC GAGCCGTCCG
GAGGTGCCGC AAAGCCTGAC CATCACCGTG TTCAAGGTGA CGGGCGAAAC CAACACGGAC
GACCTCTCGC CGGCGCCGGA CGCCACCACC CGCCCGGACA TCCCGATGCA CGCGCTGGCG
ATGCTGAAGA ACGCGCGTCC CGGCATCACG CCGGAGGAAG ACGGCAAGCG CGGCCCGATC
AAGTTCATCC AGTCGCTGAA AGAAAAAGGC CATCTGGTCG CCTACGTCGG CGACGTGGTC
GGCACCGGCT CCTCGCGCAA GTCGGCCACC AACTCGGTGC TGTGGTTCAC GGGCGAAGAC
ATCCCCTTCA TCCCGAACAA GCGCTTCGGC GGTGTGTGCC TCGGCAGCAA AATCGCGCCG
ATTTTCTACA ACACCATGGA AGACGCGGGC GCCCTGCCGA TCGAACTCGA CGTGTCGCAA
ATGGAAATGG GCGACGTGGT CGAACTGCGT CCCTACGAAG GCAAGGCGCT GAAGAACGGC
GCGGTAATCG CCGAATTCAA GGTCAAGTCC GACGTGCTAT TCGACGAGGT GCGCGCCGGT
GGCCGTATTC CTCTCATCAT CGGCCGTGGC CTGACCGCCA AGGCGCGTGA AGCGCTCGGC
CTCGCGCCGT CCACGCTGTT CCGCCTGCCG CAGCAGCCGG CCGACAGCGG CAAGGGTTTC
TCGCTCGCGC AGAAGATGGT CGGTCGTGCG TGCGGCCTGC CGGAAGGCCA GGGCGTGCGC
CCGGGCACCT ACTGCGAACC GAAAATGACC TCGGTCGGCT CGCAGGACAC CACCGGCCCG
ATGACCCGCG ACGAACTGAA AGACCTCGCG TGCCTCGGCT TCTCCGCCGA CCTCGTCATG
CAGTCGTTCT GCCACACCGC CGCGTATCCG AAGTCGGTGG ACGTGAAGAC GCACCGCACG
CTGCCGGACT TCATCAGCAA TCGTGGCGGC ATCGCGCTGC GTCCCGGCGA CGGCGTGATC
CACTCGTGGC TGAACCGCAT GCTGCTGCCC GACACCGTCG GCACCGGCGG CGACTCGCAC
ACGCGCTTCC CGATCGGCAT CAGCTTCCCG GCGGGTTCGG GGCTGGTCGC ATTTGCCGCG
GCCACCGGCA CGATGCCGCT GGACATGCCG GAATCGGTGC TGGTTCGCTT CAAGGGCAAG
ATGCAGCCGG GCGTCACGCT GCGTGACCTC GTCAACGCGA TTCCGCTGTA CGCGATCAAG
CAAGGCACGC TAACGGTCGC CAAGCAAGGC AAGAAGAACA TTTTCTCGGG CCGTGTGCTC
GAAATCGAAG GTCTGCCGGA TCTGAAGGTC GAGCAGGCGT TCGAGCTGTC GGATGCGTCC
GCCGAGCGTT CGGCTGCCGG CTGCACGGTG CACCTGAACA AGGAACCGAT CATCGAGTAC
CTGAACAGCA ACGTCACGCT GCTCAAGTGG ATGATCGCGC AGGGTTACCA GGATCCGCGC
AGCCTGCAGC GCCGCATCAA GGCCATGGAA GCATGGCTCG CCGACCCGCA ACTGCTGTCG
CCGGATGCGG ACGCCGAGTA CGCGGCCGTG ATCGAGATCG ACCTCGCCGA CATCCATGAA
CCGATCGTCG CCTGCCCGAA CGACCCGGAC GACGTGAAGA CGCTGTCCGA CGTGGCCGGT
GCGAAGATCG ACGAAGTGTT CATCGGCTCG TGCATGACGA ACATCGGTCA CTTCCGCGCG
GCGTCGAAGC TGCTGGAAGG CAAGCGCGAC ATCCCGGTCA AGCTGTGGGT CGCGCCGCCT
ACCAAGATGG ATCAGAAGCA ACTGACCGAA GAAGGCCATT ACGGCGTGTT CGGCACGGCC
GGCGCGCGTA CGGAAATGCC GGGCTGCTCG CTGTGCATGG GCAATCAGGC CCAAGTGCGC
GAAGGCGCGA CGGTCATGTC CACATCGACC CGTAACTTCC CGAACCGTCT GGGCAAGAAC
ACGAACGTGT ATCTCGGCTC GGCCGAACTG GCGGCAATCT GCTCGCGCCT GGGCAAGATT
CCAACCAAAG AGGAATACAT GGCCGACATG GGCGTGCTGA CCGCCAGCGG TGACAAGATC
TATCAGTACA TGAACTTCGA CCAGATCGAA GACTTCAAGG ACCTGGCGGA TACGGTCGCG
ATGTAA
|
|---|
| Protein sequence | MLENFRAHAA ARATLGIPPL PLTAQQTAEL VELLTNPPAG EEQTLLDLIT NRVPAGVDEA
ARVKAGFLAA VAKGETTCAL ISRARATELL GTMLGGYNIQ PLIELLSDAE VGTVAAEALK
KTLLMFDAFH DVKELADKGN ANAKAVLQSW ADAEWFTSRP EVPQSLTITV FKVTGETNTD
DLSPAPDATT RPDIPMHALA MLKNARPGIT PEEDGKRGPI KFIQSLKEKG HLVAYVGDVV
GTGSSRKSAT NSVLWFTGED IPFIPNKRFG GVCLGSKIAP IFYNTMEDAG ALPIELDVSQ
MEMGDVVELR PYEGKALKNG AVIAEFKVKS DVLFDEVRAG GRIPLIIGRG LTAKAREALG
LAPSTLFRLP QQPADSGKGF SLAQKMVGRA CGLPEGQGVR PGTYCEPKMT SVGSQDTTGP
MTRDELKDLA CLGFSADLVM QSFCHTAAYP KSVDVKTHRT LPDFISNRGG IALRPGDGVI
HSWLNRMLLP DTVGTGGDSH TRFPIGISFP AGSGLVAFAA ATGTMPLDMP ESVLVRFKGK
MQPGVTLRDL VNAIPLYAIK QGTLTVAKQG KKNIFSGRVL EIEGLPDLKV EQAFELSDAS
AERSAAGCTV HLNKEPIIEY LNSNVTLLKW MIAQGYQDPR SLQRRIKAME AWLADPQLLS
PDADAEYAAV IEIDLADIHE PIVACPNDPD DVKTLSDVAG AKIDEVFIGS CMTNIGHFRA
ASKLLEGKRD IPVKLWVAPP TKMDQKQLTE EGHYGVFGTA GARTEMPGCS LCMGNQAQVR
EGATVMSTST RNFPNRLGKN TNVYLGSAEL AAICSRLGKI PTKEEYMADM GVLTASGDKI
YQYMNFDQIE DFKDLADTVA M
|
|---|
| |