Gene Bphyt_2038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2038 
Symbol 
ID6282154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2304178 
End bp2304921 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content64% 
IMG OID642621603 
Productlipoprotein, putative 
Protein accessionYP_001895669 
Protein GI187924027 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000251498 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAACATTC GACAGCAGCA CTTCATTCGA CCTGTCGGCG CAACGCTGCT GATGGCGGGC 
GTCGTGTGGC TCGCGGGCTG CGGAGGCGAT GGTGGTGGCG GCAGCAGCGG CACGTCGATG
GTTTCGATCG CCGGCACGGC GGCAACGGGC AAGGCCCTGG CGAACGCGAC GATCAACATC
GACTGCGCAC GGGGTTCGAT GTCGGTTGCA GCGGATACGA ACGGAAACTT TCGCGCGACG
CTTAACGCCG CGATGCCATG CATGATCACC GCGACCTCGG GCGTAACGAT GCTGCATTCC
GTTGCGTTCG CCGGCGGCAC GTACAACGTC ACGCCGGAGA CGGATCTGCT GGTGTCGTAT
CTGGCGGCGC AACTCGGTAC AAATCAGACC GGACTCATCG CCAGCTTCGC GGTGAACTCA
CAGTTCCAGC AACTGCTGGC GAATCAGGCC GACGTTCTGA CTGCGCAGGC CGCGGTCGTC
CAGAATCTGC AGCAAACGTA CGGTGTCACG TTGTCCGCGC TCAATTTCCT GACGACCGCA
TTCGCAGCGG GTCAACCTGG CGAGGACAGC GATCTCGAAG CGCTCCTTAC TCGCGGCGCG
ATCGACGCCA ACGGCCAACC CGACGCCGCC GCAGTCGCGC TGATGGCCAG GACCGGGGCG
GCGCATCCGC TTGCTACATC GCCGAATAAC AGTGCGGGCG GCACCGGAGT CGGCGGCATT
GGAAGCTCGG GCGGCATGAT GTGA
 
Protein sequence
MNIRQQHFIR PVGATLLMAG VVWLAGCGGD GGGGSSGTSM VSIAGTAATG KALANATINI 
DCARGSMSVA ADTNGNFRAT LNAAMPCMIT ATSGVTMLHS VAFAGGTYNV TPETDLLVSY
LAAQLGTNQT GLIASFAVNS QFQQLLANQA DVLTAQAAVV QNLQQTYGVT LSALNFLTTA
FAAGQPGEDS DLEALLTRGA IDANGQPDAA AVALMARTGA AHPLATSPNN SAGGTGVGGI
GSSGGMM