| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2035 |
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| Symbol | |
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| ID | 6283383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2300036 |
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| End bp | 2301898 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642621600 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001895666 |
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| Protein GI | 187924024 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.871737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000000266357 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTGACT ATCGATCGAA AACTTCGACC CATGGCCGTA ACATGGCCGG CGCGCGCGCT
TTGTGGCGCG CCACCGGAAT GAAGGACGGT GATTTCGGCA AGCCCATTAT CGCGGTGGTG
AACTCGTTCA CGCAGTTCGT GCCGGGCCAT GTGCATCTGC GCGACCTCGG CGCACTCGTC
GCGAAGGAAA TCGAAGCGGC CGGCGGCGTC GCCAAGGAAT TCAACACCAT CGCCGTCGAC
GACGGCATCG CCATGGGTCA CGGCGGCATG CTGTATTCGC TGCCTTCGCG CGAATTGATC
GCCGACTCGG TGGAGTACAT GGTCAACGCG CACTGCGCCG ACGCCATGGT CTGCATCTCC
AATTGCGACA AGATCACTCC CGGCATGCTG ATGGCCGCCA TGCGCCTGAA CATCCCCGTC
GTGTTCGTCT CCGGCGGTCC AATGGAAGCG GGCAAGGTCA AATCGCCGAC GGACGGGCAG
GTGATCGCCA AGATCGACCT GATCGACGCA ATGATCAAGG CAGGCGACTC CCGCGTGAGC
GACGCCGAAG TGGCGGAAAT CGAGCGCAGC GCCTGCCCGA CGTGCGGTTC GTGCTCGGGC
ATGTTCACCG CGAATTCGAT GAACTGCCTG ACCGAAGCGA TCGGTCTGGC GCTGCCGGGC
AACGGTACGA TCGTCGCCAC GCACGCCTGG CGCAAGGGTC TGTTCGAGCA GGCCGGCCGT
CTCGTGGTGG ACCTGTGCCG CCGCTACTAT CAGGAAGACG ACGCCTCGGT CCTGCCGCGC
AGCATCGCCA GCAAGCAGGC CTTCGAGAAC GCCATGGCGC TCGACGTCGC CATGGGCGGT
TCGACCAATA CCGTGCTGCA TCTGCTGGCC GCCGCGCAGG AAGGTGGCGT CGATTTCACG
ATGTCCGACA TCGATCGCAT CTCGCGTAAG GTGCCGTGCC TGTGCAAAGT GGCGCCCGCC
ACCGACAAGT TCCATATCGA AGACGTGCAT CGTGCGGGCG GCATTCCCGG CATTCTCGGC
GAACTGGCGC GCGCGGAACT GCTCGATCTG TCGTGCGGCA ACGTGCACAG CGGCACGCTG
GGCAACGCCA TCGCCAAATG GGACGTCGCC GGTGGCGCGG GCGAGGAAGC GCAGAAGTTC
TTCCGCGCGG CGCCGGGCGG TATTCCGACC ACGGTTGCGT TCAGCCAGGA AGCCACCTTT
GCCGCGCTGG ATACCGATCG CAACACCGGT TGCATCCGCA GCAAGCAGAG CGCCTATTCG
AAAGACGGCG GCCTCGCCGT GCTTTACGGC AACCTCGCGG AGAAGGGCTG TATCGTCAAG
ACCGCCGGTG TCGATGAATC GCAGTGGATT TTCTCCGGAC GCGCGCGCGT CTTCGAGAGC
CAGGACGACG CCGTCGAAGC GATTCTGGGC GACAAGGTCG TGGCGGGCGA CGTGGTCGTA
ATCCGCTACG AAGGCCCGAA GGGCGGCCCC GGCATGCAGG AAATGCTTTA CCCCACGTCG
TATCTGAAGT CCAAGGGGTT AGGCAAGAGC TGCGCGCTCT TCACCGACGG CCGCTTCTCG
GGTGGTTCGT CGGGGCTGGT GATCGGGCAT GCGTCGCCGG AAGCGGCGGA GGGCGGCACG
ATCGGCCTGG TGGAAGAGGG CGATGTGATC GAGATCGACA TTCCCAACCG CAAGATGCAC
CTGGTGGTGT CGGACGCGGA ATTGGCGCGC CGTCGCGAAG CCATGGAGGC ACGCGGCGAC
AAAGCCTGGC AGCCGGCGAA TCGTGAACGC GTAGTGTCGC AAGCGTTGCA GGCCTACGCC
GCGCTGGCGA CCTCGGCGGA TCGTGGCGCG GTGCGGGATC TGTCGCAACT CAAGCGCAAG
TGA
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| Protein sequence | MPDYRSKTST HGRNMAGARA LWRATGMKDG DFGKPIIAVV NSFTQFVPGH VHLRDLGALV
AKEIEAAGGV AKEFNTIAVD DGIAMGHGGM LYSLPSRELI ADSVEYMVNA HCADAMVCIS
NCDKITPGML MAAMRLNIPV VFVSGGPMEA GKVKSPTDGQ VIAKIDLIDA MIKAGDSRVS
DAEVAEIERS ACPTCGSCSG MFTANSMNCL TEAIGLALPG NGTIVATHAW RKGLFEQAGR
LVVDLCRRYY QEDDASVLPR SIASKQAFEN AMALDVAMGG STNTVLHLLA AAQEGGVDFT
MSDIDRISRK VPCLCKVAPA TDKFHIEDVH RAGGIPGILG ELARAELLDL SCGNVHSGTL
GNAIAKWDVA GGAGEEAQKF FRAAPGGIPT TVAFSQEATF AALDTDRNTG CIRSKQSAYS
KDGGLAVLYG NLAEKGCIVK TAGVDESQWI FSGRARVFES QDDAVEAILG DKVVAGDVVV
IRYEGPKGGP GMQEMLYPTS YLKSKGLGKS CALFTDGRFS GGSSGLVIGH ASPEAAEGGT
IGLVEEGDVI EIDIPNRKMH LVVSDAELAR RREAMEARGD KAWQPANRER VVSQALQAYA
ALATSADRGA VRDLSQLKRK
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