Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2030 |
Symbol | |
ID | 6283378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 2293833 |
End bp | 2295134 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642621595 |
Product | Gluconate 2-dehydrogenase (acceptor) |
Protein accession | YP_001895661 |
Protein GI | 187924019 |
COG category | [C] Energy production and conversion |
COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0000305388 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACCCTCG GCGCGCTTGC CTCCAGCTAC ACAGCAGCCA GCGCCGCACC CGGCAGCGCA ACGTCAGCCG ATACCGCGCA GATCGCGCGC GGCGCCTATC TCGCGAAGGC CGCCGACTGC GCAGGCTGCC ATACGGCCGC GCCACGCGTC GTGCGGCCCG GCACGGCGCC GATTCCGGCG GCGCCGTTCG CCGGCGGTCT CGGCATGGCC TCGCCGTTCG GCACGATCAA TTCGTCGAAC ATCACGCCGG ACCCGCAGGC GGGTATCGGT CTCTACAGCT ACGACGATTT CGCGCATGCA CTGCGCGACG GCGTTGCGCG CGGCGGCAAG CGGCTTTATC CGGCGATGCC GTACCCATCG TTCGCGAAGA TCGACGATGA CGACATGCAC GCGCTCTACG CCTATTTCAT GCATGGCGTG CGGCCGGTCG CCACGCCGGC TCCGCCAACC CGATTGCCGT TCCCATTCAA CCAGCGCTGG GCGCTCATGT TCTGGGACTG GGCGTTCGTG CCGGGCGAGC GTTTCAAGCC GGAAGCAGGG CGCGACGCGC AATGGAATCG CGGCGCGTAT CTCGTGCAAT CGTTGGGTCA CTGCGGCGCG TGCCACACGC CACGCGGGCC GGCTTATGAG GAACGCGGCT ACACCGAGGC GAGTCCGCTT TATCTGACCG GCGGCACCAA CGATCACTGG TTCGCACCGA ACCTCACCGC CGACACCGGT TCGGGCCTGG GCCGGAGCTC CGCGGAGGAT ATCGCCGCTT TCCTGAAGCA CGGCCACGGC GGCGGCCTGG TCACGTTCGG CAGCATGGTT CAAGTGGTGG AAGACAGCAC GCAGTATCTC GACGATGCCG ACCTCGCGGC CATCGCCACG TATCTGAAGA GCCTGCCGCC GCGCGCTCAG AGCGGACACT TCAATGCAGG TTCGCGGGGC GCGCTGCAGA GCGTGGAGGC GCTGAAAACA GGTGAACTCG AGCGGCCGGG CGCGGGAATC TATGCAACGT ATTGCGCGCG CTGCCATCAG TCCGACGGTG CGGGCGTGCC GCAAAAATAT CCGCGCCTTG CGGGCAATCC GGCCGTGCTC GCTCCGCAAA CGACCTCGTT GGTGCGTTTG CTCGTGGAGG GCGGGGGCAG TCCGAACACG GATGGCGGCC CTGAGCCGCG CAAGATGCCG GCCTTTGCGG ACAAACTGAC CGACAGCGAA CTCGCGCACG TTCTGACTTT TATCCGCAAC ACGTGGGGCA ATGCGGCAGA ACCGGTCACG ACTCGTGACG TGTCCGCGGT GCGGCATGCC TTGCACAAAT AG
|
Protein sequence | MTLGALASSY TAASAAPGSA TSADTAQIAR GAYLAKAADC AGCHTAAPRV VRPGTAPIPA APFAGGLGMA SPFGTINSSN ITPDPQAGIG LYSYDDFAHA LRDGVARGGK RLYPAMPYPS FAKIDDDDMH ALYAYFMHGV RPVATPAPPT RLPFPFNQRW ALMFWDWAFV PGERFKPEAG RDAQWNRGAY LVQSLGHCGA CHTPRGPAYE ERGYTEASPL YLTGGTNDHW FAPNLTADTG SGLGRSSAED IAAFLKHGHG GGLVTFGSMV QVVEDSTQYL DDADLAAIAT YLKSLPPRAQ SGHFNAGSRG ALQSVEALKT GELERPGAGI YATYCARCHQ SDGAGVPQKY PRLAGNPAVL APQTTSLVRL LVEGGGSPNT DGGPEPRKMP AFADKLTDSE LAHVLTFIRN TWGNAAEPVT TRDVSAVRHA LHK
|
| |