| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1983 |
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| Symbol | |
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| ID | 6283771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2234815 |
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| End bp | 2237355 |
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| Gene Length | 2541 bp |
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| Protein Length | 846 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642621548 |
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| Product | nitrite reductase (NAD(P)H), large subunit |
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| Protein accession | YP_001895614 |
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| Protein GI | 187923972 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.385914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.488023 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCA TCGTTATCGG TCACGGGATG GTCGGTCACA AACTGGTCGA GTGCCTCGCA
CAAGACGCCG CGCACGGACT CGACATCACG GTGCTGTGCG AGGAATCGCG GCCGGCCTAC
GACCGTGTGC ACCTGTCGGA GTTTTTCGCG GGCAAGACGG CGGACGATCT GTCGCTGGTC
GAGCCCGGCT TCTTCGAACG TCAGAACGTG TTACTCAAAC TGAATGCGAA GGCCGTGGCG
ATCGATCGCG ATGCGCGCAC CGTGACGGTA TCGACAGGCG AAACATTACC TTATGACAAG
CTGGTTTTCG CCACCGGCTC CTATCCGTTC GTGCCGCCGG TGCAAGGCCG TGAACGCGCC
GATTGCTTCG TGTACCGAAC TATCGACGAC CTCGAAGCGA TGCGCGAATG CGGCGCGCGC
TCGAAGACGG GCACGGTGGT GGGCGGCGGA CTGCTCGGCC TCGAATGCGC GAAGGCGCTG
CGCGACATGG GTCTGCAAAC GCACGTGGTC GAATTCGCGC CGCGTTTGAT GGCCGTGCAG
GTGGACGACG GCGGCGGCCG TGTGTTGCGC GGCAAGATCG AAGAACTCGG CGTGACGGTG
CATATGCAGA AGAACACCAC GGCGATCGTC GACGGCGAAG CGGGCACGCA CCGCATGCAA
TTCGCCGACG GCAGCCATCT CGACACCGAC ATGATCGTAT TCTCTGCGGG CATTCGTCCG
CGTGACGATC TCGCGCGTGC GAGCGGCCTG ACGCTCGGCC CGCGTGGCGG CATCGTGATC
GACAACGCGT GCCGCACGAG CGATCCGCAC ATCTACGCGA TCGGCGAATG CGCGCTGTGG
AATGGCCAAC TGTTCGGCCT CGTGGCGCCG GGTTACGACA TGGCTCGCGC GGTGGCGAAG
CAATTGCTGG GCGACACGGC GGAATTCGCC GGCGCCGACA TGAGCACCAA GCTCAAGCTG
ATGGGCGTGG ATGTGGCGAG CATCGGCGAC GCGCACGGCA ACACGCCGGG CAGCCGCGCG
TACCAGTTCA GCGACGAGCG CAAGCAGGTC TACAAGAAGC TGGTGGTGTC CGAGTGCGGC
AAATATCTGC TGGGCGGCGT GATGGTGGGC GACGCCGCCG AATACGGCAC GCTGCTGCAG
ATGATGTTGA ACCGCATCGA ACTGCCTGCA TCGCCTGAAT TCCTGATCCT GCCGGCGGCC
GACGGCAATG CGAAGCCCGC GCTCGGAGTC GATTCCTTGC CCGCTTCCGC GCAAATCTGT
TCGTGCAACA ACGTCTCGAA GGGCGAGTTG TGCGCCGCCG TTTGCGCAGG CGCGACCGAC
ATCGGCGCTT TGAAGTGCGC GACGACCGCC GGCACGTCAT GCGGCGGTTG CGTGCCGCTC
GTCACGCAAG TGATGAAGGC CGAGATGAAG AAGCAGGGAC TCGCGGTCAA CAACCACGTC
TGCGAACACT TCGCGTATTC GCGCCAGGAG CTGTATCACA TCGTGCGTGT GGAAGGCGTG
CGCAGCTTCG GCGAACTGCT CGCGAAGCAC GGCCACGGCC TTGGCTGCGA TATCTGCAAG
CCGGTGGTGG CGAGCGTGCT CGCGTCGTGC TGGAACGAGT TCGTGTTGAA GAAAGAGCAC
GCCTCGCTGC AGGACACCAA CGACTATTAC CTCGCCAACA TTCAGCGCGA CGGCACCTAT
TCGGTCGTGC CGCGCATGGC GGGCGGCGAA GTCACCCCCG ATGGTTTGAT CGCGGTCGGC
CAGGTCGCCA AAAAATACGG CCTCTATACG AAGATCACCG GCGGCCAGCG TGTCGATCTG
TTCGGCGCGC GCGTCGAGCA ATTGCCGCTC ATCTGGGAAG AGCTGATCGC CGCTGGTTTC
GAATCGGGCC ACGCGTACGG CAAGTCGCTG CGCACGGTGA AATCGTGTGT CGGTTCGACG
TGGTGCCGCT ACGGCGTCGG CGATTCGGTG GGCCTCGCGG TGGAGATCGA GAACCGCTAC
AAGGGCCTGC GCACGCCGCA CAAGATCAAG TTCGGCGTGT CGGGCTGCAC TCGCGAATGC
GCGGAAGCGC AAGGCAAGGA CGTCGGCATC ATCGCGACCG AGAAGGGCTG GAATCTCTAT
GTGTGCGGCA ATGGCGGCAT GAAGCCGCGC CACGCCGAAC TGCTCGCGTC GGACCTCGAT
AAGGAAACGC TGGTGCGCTA CATCGACCGT TTCCTGATGT TCTACGTGCG CACCGCAGAC
CGCCTGCAAC GCACCAGCGT GTGGCGCGAG AACCTCGAAG GCGGCCTGGA TTATCTGATC
GACGTGGTCG TCAACGACCA CCTGGGTGTG GCCGACGAAC TCGAGTCGGA AATGCAGCAC
GTGGTCGACA CCTACGAGTG CGAATGGAAA AAGGCCGTCA CCGATCCCGA AACGCGCAAG
CGCTTCCGTC ATTTCGTCAA CAGCGGCGAG TCGGACAGCA ACGTTGCGTT CGTGGAGGAA
CGCGGCCAGA TCCGGCCGGC CACACCCGCC GAGCGGCGCT CGAAGCTCGC GGCGATTCCC
GTTGTCGTCG AAACCGTTTG A
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| Protein sequence | MKIIVIGHGM VGHKLVECLA QDAAHGLDIT VLCEESRPAY DRVHLSEFFA GKTADDLSLV
EPGFFERQNV LLKLNAKAVA IDRDARTVTV STGETLPYDK LVFATGSYPF VPPVQGRERA
DCFVYRTIDD LEAMRECGAR SKTGTVVGGG LLGLECAKAL RDMGLQTHVV EFAPRLMAVQ
VDDGGGRVLR GKIEELGVTV HMQKNTTAIV DGEAGTHRMQ FADGSHLDTD MIVFSAGIRP
RDDLARASGL TLGPRGGIVI DNACRTSDPH IYAIGECALW NGQLFGLVAP GYDMARAVAK
QLLGDTAEFA GADMSTKLKL MGVDVASIGD AHGNTPGSRA YQFSDERKQV YKKLVVSECG
KYLLGGVMVG DAAEYGTLLQ MMLNRIELPA SPEFLILPAA DGNAKPALGV DSLPASAQIC
SCNNVSKGEL CAAVCAGATD IGALKCATTA GTSCGGCVPL VTQVMKAEMK KQGLAVNNHV
CEHFAYSRQE LYHIVRVEGV RSFGELLAKH GHGLGCDICK PVVASVLASC WNEFVLKKEH
ASLQDTNDYY LANIQRDGTY SVVPRMAGGE VTPDGLIAVG QVAKKYGLYT KITGGQRVDL
FGARVEQLPL IWEELIAAGF ESGHAYGKSL RTVKSCVGST WCRYGVGDSV GLAVEIENRY
KGLRTPHKIK FGVSGCTREC AEAQGKDVGI IATEKGWNLY VCGNGGMKPR HAELLASDLD
KETLVRYIDR FLMFYVRTAD RLQRTSVWRE NLEGGLDYLI DVVVNDHLGV ADELESEMQH
VVDTYECEWK KAVTDPETRK RFRHFVNSGE SDSNVAFVEE RGQIRPATPA ERRSKLAAIP
VVVETV
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