Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1959 |
Symbol | |
ID | 6284779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 2205542 |
End bp | 2207740 |
Gene Length | 2199 bp |
Protein Length | 732 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642621525 |
Product | capsular exopolysaccharide family |
Protein accession | YP_001895591 |
Protein GI | 187923949 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.901256 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGTC CGATCAAGAC CGAAGAAGAG GACGTCGTCC TCGGACAACT GGTGCAGGTG ATCCTCGATG ACATCTGGTG GCTCATCGCC ATCGCCGCGG TGATCGTCGG GATCGCCGGC GCTTATTGTT TTCTCGCCAA GCCGATCTAT TCGGCCGACG CGCATGTGCG GGTCGAGCAA TCGGACAACA CGTCGCAGGC GCTCACGCAG ACGCAGACCG GCGCGGCGAT CACCACCGGC TCGACCTCGT TGCCGACCGA CGCCGAGATC GAAATCATCA AGAGCCGCGG CGTGGTCGGC CCGGTCGTGC AGCAACTGAA GCTGAACTTC AGCGTCACGC CGAAAACCTT CCCTCTGCTC GGCAGCATCG CCGCGCGCAT GGCCACGCCG GGGCAACCCG CGCGTCCGTG GCTCGGTTTG TCGTCGTATG CATGGGGCGG TGAAGAGGCC GACGTCGATT CGATCGACGT GATCCCCGCG CTGGAAGGTC AGAAGCTCAC CATGAAGGCG ATCGACGACC AGCACTACAA CCTGTACGCC GCGAACGGCT CGCTGCTGCT GCACGGCCAG GTCGGGCAGC AGGAGCAGGG CGGCGGCGTG ACCATCACGG TCGACAAGCT GGTGGCCCGA CCGGGCGAGG AATTCACGGT GATGCGCGCC AACGACCTCG ACGCGATCTC CGCGTTCCAG TCGGCCATCA CGGTGCAGGA GCAGGGCAAG CAGACCGGCG TGATCCAGAT CTCGCTGGAA GACAAGAGCC CCGAACATGC CGCGCTCGTC GCCAACGCGC TGGCGGAGTC GTATGTGCGC CAGCACGTGC TGAACAAGCA GGCCGACGCC AGCAAGATGC TCGACTTCCT CAAGAGCGAG GAGCCGCGCC TGAAGTCCGA TCTGGAACGC GCCGAGGCCG CGCTGACCGC GTATCAGCGC CAGTCCGGCT CGATCAACGC GAGCGACGAG GCCAAGGTGT ACCTCGAAGG CAGCGTGCAG TACGAGCAGC AGATCGCAGG CCTTCGTCTG CAGATGGCGC AGCTCACCGA GCGTTACGGC GACGACCATC CGATGCTCGT CGCCGCGCGT GCGCAGATGG CCGAATTGCA GGCGCAGCGC ACCAAATACG CGGACCGCTT CCGCGATCTG CCGGCCACCG AAGTGAAGGC CGTGCAGTTG CAGCGCGACG CGAAGGTGGC CGAAGACATC TACGTGCTGC TGCTCAACCG CGTGCAGGAA CTGTCGGTGC AGAAGGCAGG CACCGGCGGC AACGTGCATA TCGTCGACGC CGCGCTGCGC CCGGGCGTGC CGGTCAAGCC GAAGAAGGCG CTGATTCTGT CGGCGGCGGT GATTCTCGGG CTGATCGCGG GCACGGGCTT CGTGTTCCTG CGCCGCAATA TGTTCAAGGG CATCGACGAC CCGGATCACA TCGAGCGTGC CTTCCATTTG CCGGTGTTCG GCCTCGTGCC GCTCTCCGCC GAACAGGGCG TGCTCGAAGC CGGCTTCCAG CGCGGCGGCG AACGTCTACG CTCGGTGCTC GCGAACGCGC GGCCGAAGGA CGTCACGGTC GAAAGCCTGC GCAGTCTGCG CACGTCCATG CAGTTCACGC TGATGGATGC GAAGAACCGC ATTGTCATGC TGACGGGTCC GATGGCGGGC GTCGGCAAAA GCTTTCTCAC GGTCAACCTC GCGGTGCTGC TCGCGAACTC CGGCAAGCGC GTGCTGATGA TCGACGGCGA CATGCGCCGC GGCGTGCTCG AACGCTATCT GGGCGGTGCG CCGGATAACG GCCTGTCCGA ATTGTTGAGC GGCCAGATTT CGCTGGAAGA AGCGATCCGC AGCTCGCAGG TCGACGGCCT GAGCTTCATC TCGTGCGGCC GCCGTCCGCC GAATCCGTCG GAACTGCTGA TGTCGCCGCG TCTGCCGCAG TACCTCGAAG GCCTCGCCAA GCGCTACGAC GTGATCATGA TCGACACGCC GCCGGTGCTG GCCGTGACCG ATGCGTCGAT CATCGGCGCG TATGCCGGCT CGACCTTCTT CGTGATGCGC TCGGGCATGC ACAGCGAGGG CGAGATCAAC GACGCGTTGA AGCGTCTGCG CGCGGCCGGC GTGCACGTGC AGGGCGGCAT TTTCAACGGC ATGCCGGCGC GCTCGCGCGG CGGCTACGAC CGTGGCTACG CGGCGGTGCA GGAATACCTG AGCACCTGA
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Protein sequence | MAGPIKTEEE DVVLGQLVQV ILDDIWWLIA IAAVIVGIAG AYCFLAKPIY SADAHVRVEQ SDNTSQALTQ TQTGAAITTG STSLPTDAEI EIIKSRGVVG PVVQQLKLNF SVTPKTFPLL GSIAARMATP GQPARPWLGL SSYAWGGEEA DVDSIDVIPA LEGQKLTMKA IDDQHYNLYA ANGSLLLHGQ VGQQEQGGGV TITVDKLVAR PGEEFTVMRA NDLDAISAFQ SAITVQEQGK QTGVIQISLE DKSPEHAALV ANALAESYVR QHVLNKQADA SKMLDFLKSE EPRLKSDLER AEAALTAYQR QSGSINASDE AKVYLEGSVQ YEQQIAGLRL QMAQLTERYG DDHPMLVAAR AQMAELQAQR TKYADRFRDL PATEVKAVQL QRDAKVAEDI YVLLLNRVQE LSVQKAGTGG NVHIVDAALR PGVPVKPKKA LILSAAVILG LIAGTGFVFL RRNMFKGIDD PDHIERAFHL PVFGLVPLSA EQGVLEAGFQ RGGERLRSVL ANARPKDVTV ESLRSLRTSM QFTLMDAKNR IVMLTGPMAG VGKSFLTVNL AVLLANSGKR VLMIDGDMRR GVLERYLGGA PDNGLSELLS GQISLEEAIR SSQVDGLSFI SCGRRPPNPS ELLMSPRLPQ YLEGLAKRYD VIMIDTPPVL AVTDASIIGA YAGSTFFVMR SGMHSEGEIN DALKRLRAAG VHVQGGIFNG MPARSRGGYD RGYAAVQEYL ST
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