Gene Bphyt_1955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1955 
Symbol 
ID6281746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2200703 
End bp2202100 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content63% 
IMG OID642621521 
ProductUndecaprenyl-phosphate glucose phosphotransferase 
Protein accessionYP_001895587 
Protein GI187923945 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID[TIGR03023] Undecaprenyl-phosphate glucose phosphotransferase
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.233038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.963876 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGCG TTCTATCGAG AATCATCGAC ATCGCCATGG TCGCGCTCGG CGCCGCCATT 
GCGGCGGCCG TGCACAGCGG GAAAGTCGTG TGGCTGGACG ATATGCAAAG CGTCTCGCTC
GCGTTCGATT GCCTGCTGGT GGTGGTGTTT TTCCCGGCGC TCGGGATCTA TCAGTCGTGG
CGCGGCAAGC CGCTCTACGA CCTGCTGTGC CGCGTGGCGG GCGGCTGGCT GCTGGTGGAA
GTCACCGGCG TGCTGATCAG TTTCAGCCTG CACCGCTCGG ACAGCCTGTC GCGGCTGTGG
CTCGTCTATT GGGCCGTGGC CACCATCGTG CTGCTGATCG TCACCAAGGT GATCGTCTAT
TCGATTCTGC GCGGACTGCG CCGCGAAGGC TTCAATCAGC GCGCGGTGGC GATCGTCGGC
GGCGCGCCGT ATGGGCGCTT TCTGATCCAG CAGATGCGCA GCCGTCCTGA CGCGGGCTTC
TCGCCGGTCG TGGTGTTCGA CGAAGACAGC ACGATCAATC ACTATGAAGA CCCGGACGCG
GGCGAGGTGA TCGAAGGCGT GCCGGTCGAG CGCGACTATC AGCGCATGCT GCAGCTCGTG
CGCCAGCGCG CGATCCGCGA ACTGTGGCTG GCGCTGCCGA TCTCGAAGGA AAAAGCGATC
CATCGCTTCG TGATGGATCT GCGCAACGAC TTCGTGAACA TCCGCTTCAT TCCGGACGTG
CGCAGCCTGA CGCTGTTCAA TCAGCCGATG GTCGATCTGC TCGGCGTGCC GGCGATCAAC
CTGGCCGCCT CGCCGATCAC CGATCTGCGC GTGCTGCCCA AGCGTGTGTT CGACCGTCTG
TTCGCGCTCG CCGCGTTGAC CGCGCTCGCG CCGGTGATGC TGGTGATCGC CGCCGCGGTG
AAGATCAACT CGCCGGGACC CGTATTTTTC CGGCAAAAGC GCAAGGGCAT CGACGGCCAT
CAGTTCGAGA TCTACAAGTT CCGCTCGATG AAGATGCACA AGGAAGAGCA CGGCAAGATC
ACCCAGGCCA CACGGCGCGA TCCGCGCATC ACGGCGGTCG GCGCGTTCCT GCGGCGCACC
AGTCTCGACG AACTGCCGCA GTTCATCAAC GTGCTGCGCG GCGAGATGTC GGTGGTCGGT
CCGCGTCCGC ACGCGCTCGA ACACGACGAC ATCTACAAGG ATCTGGTGAA GGGCTACATG
CACCGCTACC GGATCAAGCC GGGCATCACC GGGTGGGCGC AGATCAACGG CTATCGCGGC
GAAACCGACC GCATCGAAAA GATGATGGGC CGTGTCAAGC TCGATCTGTA CTACATGCAG
CACTGGACCT TCTGGCTCGA CATCAAGATC GTCGTGCTGA CGCTGTGGAA AGGCTTCGTG
GGCAGCAACG CCTATTGA
 
Protein sequence
MLSVLSRIID IAMVALGAAI AAAVHSGKVV WLDDMQSVSL AFDCLLVVVF FPALGIYQSW 
RGKPLYDLLC RVAGGWLLVE VTGVLISFSL HRSDSLSRLW LVYWAVATIV LLIVTKVIVY
SILRGLRREG FNQRAVAIVG GAPYGRFLIQ QMRSRPDAGF SPVVVFDEDS TINHYEDPDA
GEVIEGVPVE RDYQRMLQLV RQRAIRELWL ALPISKEKAI HRFVMDLRND FVNIRFIPDV
RSLTLFNQPM VDLLGVPAIN LAASPITDLR VLPKRVFDRL FALAALTALA PVMLVIAAAV
KINSPGPVFF RQKRKGIDGH QFEIYKFRSM KMHKEEHGKI TQATRRDPRI TAVGAFLRRT
SLDELPQFIN VLRGEMSVVG PRPHALEHDD IYKDLVKGYM HRYRIKPGIT GWAQINGYRG
ETDRIEKMMG RVKLDLYYMQ HWTFWLDIKI VVLTLWKGFV GSNAY