| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1940 |
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| Symbol | |
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| ID | 6282398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2183679 |
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| End bp | 2184713 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642621506 |
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| Product | DNA polymerase III subunit delta' |
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| Protein accession | YP_001895572 |
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| Protein GI | 187923930 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.990114 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.368252 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTATC CGTGGCAAGC CGATGACTGG AACCGCCTGC AGCAGCTGCG CGGCCACTGG
CCGCACGCTC TGTTGCTGCA TGGACAGGCC GGCATCGGCA AGCTGCGCTT CGCGCAGCAT
CTCGCGCAAG GCCTGCTGTG CGAGGCGCAG CAGCCCAACG GCGAGCCGTG CGGCGCGTGC
GTGGCCTGCA ACTGGTTCGC GCAGGGCAAT CATCCGGATT ACCGCATCGT CGTGCCCGAG
GCACTGGCCG CCGAAGCCGG CCTGAACAGC GGCGCGGACG AAAAAGCCGA CAAGGCCGAC
GCCGACGAAG GCAAAAAGAC CCGCGCGCCC AGCAAGGAAA TCAAGATCGA ACAGATTCGC
GGCTTGCTCG ACTTCGTCGG TGTGGGTTCG CACCGCGGCG GCGCGCGTGT GGTCGTGCTG
TATCCGGCGG AAGGGCTGAA CATCGCCGCG GCCAATGCGC TCCTGAAGAC GCTCGAAGAA
CCGCCGGCGG GCGTCGTGTT CCTGATGGTG TCGGCGCGCA TCGACCGCCT GCTGCCCACC
ATCATCAGCC GCTGCCGCCA ATGGCCGATG ACCATGCCCG CGCCCGAGGT GGCGACGAAA
TGGCTCGCCG CGCAAGGCGT GGCCGAGGCG CCCGCGCTGC TCGCCGAAGC AGGCGGTGCG
CCGCTCACCG CACTCGCGCT TGCCAGCGAC GAGAACCGCG CGCTGCGCGA CTGGACGCTC
AAGCAACTTG CCGCCGGCCC CGATTGCGAT GCTTTCGCGT GCGGCGAGGC GCTGCAGAAG
CTGCCCGTGC CGCTGGTGCT AGGCTGGCTG CAACGCTGGA TGTACGATTT GCTGGCGCAG
CGCACGGCAG GCGCGCCGCG GTATTTTCCA CAGGCGTCGG CGGCGTTGAC GCGCTGCGCG
TCGCAGGCCG ATGCCAGCGC GTTCGCTCGC TTCACGCGCA TCGTGACGCG CCAGCGCGCC
GTCGAGAACC ATCCGCTGAA TGCTCGGCTG GTGTTCGAGG AACTGTTTAT CGGGTACCGC
GAGTTGTTCG CCTAG
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| Protein sequence | MIYPWQADDW NRLQQLRGHW PHALLLHGQA GIGKLRFAQH LAQGLLCEAQ QPNGEPCGAC
VACNWFAQGN HPDYRIVVPE ALAAEAGLNS GADEKADKAD ADEGKKTRAP SKEIKIEQIR
GLLDFVGVGS HRGGARVVVL YPAEGLNIAA ANALLKTLEE PPAGVVFLMV SARIDRLLPT
IISRCRQWPM TMPAPEVATK WLAAQGVAEA PALLAEAGGA PLTALALASD ENRALRDWTL
KQLAAGPDCD AFACGEALQK LPVPLVLGWL QRWMYDLLAQ RTAGAPRYFP QASAALTRCA
SQADASAFAR FTRIVTRQRA VENHPLNARL VFEELFIGYR ELFA
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