Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1939 |
Symbol | tmk |
ID | 6284141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 2182964 |
End bp | 2183584 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642621505 |
Product | thymidylate kinase |
Protein accession | YP_001895571 |
Protein GI | 187923929 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0125] Thymidylate kinase |
TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.622457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.256999 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGGG GCAAATTCAT TACGTTTGAG GGCATCGACG GGGCGGGCAA GACCACCCAT CTCAGCTGGT TTCGGGAGCG CCTCGAACAG AAAGTCGCGA GCACCGGCCG CTCGGTCGTG ATGACGCGCG AACCCGGCGG CACGCCGCTC GGCGAGCAGA TCCGCGAGAT CGTACTGCAT CAGAAAATGG ACCTCGAAAC CGAGGCGCTG CTGATGTTCG CGCTGCGCCG CCAGCACCTG GCCGAAGTGA TCGAGCCGGC GCTCGCACGC GGCGACTGGG TGCTGTCGGA CCGTTTCACC GACGCGACTT TCGCCTATCA GGGCGGTGGC CGCGGTCTGC CACGCGACAA GCTGGAAACG CTGGAGCGCT GGGTGCAGGG CGGTTTTCAG CCGGATCTGA CGGTGCTGTT CGACCTCGCG CCCGAGATTG CCAACGAACG GCGCAGCGCG GCGCGCGATC CGGATCGCTT CGAGAGCGAG TCGGTGGCGT TTTTCAACCG CACGCGCGCC GAATATCTGC GCCGCGCCGA AGAAGCGCCG TACCGGTTCG CTATCATTGA CTCCGCGCAG AGCATTGTGC AGATTCAGAG AAAACTTGAG GAATTGATCG CAATTCTTTG A
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Protein sequence | MARGKFITFE GIDGAGKTTH LSWFRERLEQ KVASTGRSVV MTREPGGTPL GEQIREIVLH QKMDLETEAL LMFALRRQHL AEVIEPALAR GDWVLSDRFT DATFAYQGGG RGLPRDKLET LERWVQGGFQ PDLTVLFDLA PEIANERRSA ARDPDRFESE SVAFFNRTRA EYLRRAEEAP YRFAIIDSAQ SIVQIQRKLE ELIAIL
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