Gene Bphyt_1939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1939 
Symboltmk 
ID6284141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2182964 
End bp2183584 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content64% 
IMG OID642621505 
Productthymidylate kinase 
Protein accessionYP_001895571 
Protein GI187923929 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.622457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.256999 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGGG GCAAATTCAT TACGTTTGAG GGCATCGACG GGGCGGGCAA GACCACCCAT 
CTCAGCTGGT TTCGGGAGCG CCTCGAACAG AAAGTCGCGA GCACCGGCCG CTCGGTCGTG
ATGACGCGCG AACCCGGCGG CACGCCGCTC GGCGAGCAGA TCCGCGAGAT CGTACTGCAT
CAGAAAATGG ACCTCGAAAC CGAGGCGCTG CTGATGTTCG CGCTGCGCCG CCAGCACCTG
GCCGAAGTGA TCGAGCCGGC GCTCGCACGC GGCGACTGGG TGCTGTCGGA CCGTTTCACC
GACGCGACTT TCGCCTATCA GGGCGGTGGC CGCGGTCTGC CACGCGACAA GCTGGAAACG
CTGGAGCGCT GGGTGCAGGG CGGTTTTCAG CCGGATCTGA CGGTGCTGTT CGACCTCGCG
CCCGAGATTG CCAACGAACG GCGCAGCGCG GCGCGCGATC CGGATCGCTT CGAGAGCGAG
TCGGTGGCGT TTTTCAACCG CACGCGCGCC GAATATCTGC GCCGCGCCGA AGAAGCGCCG
TACCGGTTCG CTATCATTGA CTCCGCGCAG AGCATTGTGC AGATTCAGAG AAAACTTGAG
GAATTGATCG CAATTCTTTG A
 
Protein sequence
MARGKFITFE GIDGAGKTTH LSWFRERLEQ KVASTGRSVV MTREPGGTPL GEQIREIVLH 
QKMDLETEAL LMFALRRQHL AEVIEPALAR GDWVLSDRFT DATFAYQGGG RGLPRDKLET
LERWVQGGFQ PDLTVLFDLA PEIANERRSA ARDPDRFESE SVAFFNRTRA EYLRRAEEAP
YRFAIIDSAQ SIVQIQRKLE ELIAIL