Gene Bphyt_1928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1928 
Symbol 
ID6284322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2172504 
End bp2173007 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content65% 
IMG OID642621494 
ProductWater Stress and Hypersensitive response domain protein 
Protein accessionYP_001895560 
Protein GI187923918 
COG category[S] Function unknown 
COG ID[COG5608] Conserved secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.198508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.554929 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTCT TCCGCGCGCT GCTGTCCGGC CGTTCCGTTC GTCTGGCTAC ATTCCTCGCC 
ATCGTCGCGC TGACGCTCCA CGGTTGCGCC GGCCTGTTCG GCGGCGACCC GGTGCGCGTG
AACGTGGCGG GCATCGAACC GATCGACAGC CAGGGCTTGG AGATGCGCTT CAACGTGAAA
CTGCGCGTGC AGAATCCCAA CGATTCCGCA GTCAGCTTCA ACGGCGTGTC GCTCGATCTC
GAACTGAACG GCAAGCCGTT CGCGAGCGGT GTGAGCGATC AGGTCGGCAC GGTGCCGCGC
TACGGCGAAA CGGTCGTCAA TGTGCCGTTG ACAGTGCCCG CTTTCGCCGC GGTTCGCCAG
GCCTTCGCCT TCGCGGGCGC CACCCAGTCG GGACAGATTC CGTACATTTT GCGCGGCAAG
CTCGCCGGTG GACTGACGGG CACGACGCGA TTCGTCGATC AGGGCAGCTT GAGCCTGCCG
TCGGCCGGCA TGGCTTTGCC TTGA
 
Protein sequence
MSFFRALLSG RSVRLATFLA IVALTLHGCA GLFGGDPVRV NVAGIEPIDS QGLEMRFNVK 
LRVQNPNDSA VSFNGVSLDL ELNGKPFASG VSDQVGTVPR YGETVVNVPL TVPAFAAVRQ
AFAFAGATQS GQIPYILRGK LAGGLTGTTR FVDQGSLSLP SAGMALP