Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1928 |
Symbol | |
ID | 6284322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 2172504 |
End bp | 2173007 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642621494 |
Product | Water Stress and Hypersensitive response domain protein |
Protein accession | YP_001895560 |
Protein GI | 187923918 |
COG category | [S] Function unknown |
COG ID | [COG5608] Conserved secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.198508 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.554929 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTTCT TCCGCGCGCT GCTGTCCGGC CGTTCCGTTC GTCTGGCTAC ATTCCTCGCC ATCGTCGCGC TGACGCTCCA CGGTTGCGCC GGCCTGTTCG GCGGCGACCC GGTGCGCGTG AACGTGGCGG GCATCGAACC GATCGACAGC CAGGGCTTGG AGATGCGCTT CAACGTGAAA CTGCGCGTGC AGAATCCCAA CGATTCCGCA GTCAGCTTCA ACGGCGTGTC GCTCGATCTC GAACTGAACG GCAAGCCGTT CGCGAGCGGT GTGAGCGATC AGGTCGGCAC GGTGCCGCGC TACGGCGAAA CGGTCGTCAA TGTGCCGTTG ACAGTGCCCG CTTTCGCCGC GGTTCGCCAG GCCTTCGCCT TCGCGGGCGC CACCCAGTCG GGACAGATTC CGTACATTTT GCGCGGCAAG CTCGCCGGTG GACTGACGGG CACGACGCGA TTCGTCGATC AGGGCAGCTT GAGCCTGCCG TCGGCCGGCA TGGCTTTGCC TTGA
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Protein sequence | MSFFRALLSG RSVRLATFLA IVALTLHGCA GLFGGDPVRV NVAGIEPIDS QGLEMRFNVK LRVQNPNDSA VSFNGVSLDL ELNGKPFASG VSDQVGTVPR YGETVVNVPL TVPAFAAVRQ AFAFAGATQS GQIPYILRGK LAGGLTGTTR FVDQGSLSLP SAGMALP
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