Gene Bphyt_1924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1924 
Symbol 
ID6283599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2165439 
End bp2166995 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content64% 
IMG OID642621490 
Producthypothetical protein 
Protein accessionYP_001895556 
Protein GI187923914 
COG category[S] Function unknown 
COG ID[COG0397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.064946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.732324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTTT CCCCAAGCAT TGCAGGGTTA TCCGGGCCTT TGTCGGCCCT TTCCGATGCG 
CTCACCACGT TGCACGAGAG CGCGTTCGCA CGGCTCGGCA GCGTGTTTCT GACGCGTCTG
CCGGCGGCGC CGCTCAGTGC GCCGTACCTC GTCGGGTTCT CCGCCGAAAC CGCCGCGCTG
CTCGGTTTAG AGCCGGGCCT CGAGAATGAT CCGGGCTTTG CCGAACTGTT CTCCGGCAAC
CTCACGCGCG AGTGGCCGGC CGAGGCGCTG CCTTATGCGT CGGTCTATTC CGGGCACCAG
TTCGGCGTGT GGGCCGGCCA GCTCGGCGAC GGCCGCGCGC TCGGTCTCGG CGAAGTCGAA
CATAATGGCC AGCGCTTCGA GTTGCAGCTC AAAGGCGCGG GGCGCACGCC CTATTCGCGC
ATGGGCGACG GCCGCGCGGT GTTGCGTTCG TCGATCCGCG AGTATCTGTG TTCGGAGGCG
ATGCATCACC TCGGCATTCC GACCACGCGC GCGCTGTGCG TGATCGGCTC CGATCAGCCG
GTGCGGCGCG AGACCGTCGA AACAGCCGCC GTAGTCACAC GCGTGGCGCC GAGCTTCGTG
CGCTTCGGCC ACTTCGAGCA CTTCTATTCG AACGATCGCA CCGACGCGCT GCGCGCGCTC
GCCGATCATG TGATCGAGCG CTTCTATCCG CATTGCCGCG AAGCCGACGA TCCGTATCTC
GCGCTGCTCA ATGAAGCGGT CATCTCGACC GCTGACCTGA TGGTCGACTG GCAGGCGGTC
GGCTTCTGCC ACGGCGTGAT GAACACCGAC AATATGTCGA TCGTCGGCCT CACCATCGAT
TACGGTCCGT TCGGTTTCAT GGACGGCTTC GACGCCGGCT ACATCTGCAA TCACTCCGAT
TCGCAGGGCC GTTACGCGTA CAAGATGCAG CCGCAGATCG CCTACTGGAA CCTGTTCTGT
CTCGCGCAAG GGCTATTGCC GCTGCTAGGC GAAAAACACG AGGAAAGCGT GCGCGGCGAC
AAGGCGATCG AAGACGCGCA ACGTGTGCTC GGCGGTTTCA AGAATCGCTT TGCGCCGGCG
CTGGAACGGC GCATGCGCGC CAAGCTCGGC CTCGAAATTG AACGCGAGGG TGACGATGGT
CTGGTCAATC GCCTATTCGA GGTGATGCAC GCCAATCGTG CGGATTTCAC GCTGACCTTC
CGAAATCTGG CGCGCGTGTC GAAGCACGAC GCAAGCGGCG ACGCGCCAGT GCGCGATCTG
TTTCTCGACC GCGCCGCCTT CGACGCCTGG GTGAACGACT ACCGCGCGCG GCTGTCCGAA
GAAACACGCG ACGACGCCGC GCGCGCCATT GCAATGAACC GTGTGAACCC CAAATTCGTA
CTTCGCAATC ATCTGGCGGA AACGGCGATC CGCCGCGCGA AAGAGAAGGA TTTCTCCGAA
GTGGAACGAC TGGCGGCCAT CCTGCGCCGT CCGTTCGACG AACAGCCCGA GCACGAAGCG
TATGCCGGGC TGCCGCCGGA CTGGGCGAGC TCGCTGGAAG TGAGCTGCTC GTCGTGA
 
Protein sequence
MSFSPSIAGL SGPLSALSDA LTTLHESAFA RLGSVFLTRL PAAPLSAPYL VGFSAETAAL 
LGLEPGLEND PGFAELFSGN LTREWPAEAL PYASVYSGHQ FGVWAGQLGD GRALGLGEVE
HNGQRFELQL KGAGRTPYSR MGDGRAVLRS SIREYLCSEA MHHLGIPTTR ALCVIGSDQP
VRRETVETAA VVTRVAPSFV RFGHFEHFYS NDRTDALRAL ADHVIERFYP HCREADDPYL
ALLNEAVIST ADLMVDWQAV GFCHGVMNTD NMSIVGLTID YGPFGFMDGF DAGYICNHSD
SQGRYAYKMQ PQIAYWNLFC LAQGLLPLLG EKHEESVRGD KAIEDAQRVL GGFKNRFAPA
LERRMRAKLG LEIEREGDDG LVNRLFEVMH ANRADFTLTF RNLARVSKHD ASGDAPVRDL
FLDRAAFDAW VNDYRARLSE ETRDDAARAI AMNRVNPKFV LRNHLAETAI RRAKEKDFSE
VERLAAILRR PFDEQPEHEA YAGLPPDWAS SLEVSCSS